RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SYNGR4O95473 234 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 FCGR2AP12318 317 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 PRKCAP17252 672 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 EEF1B2P24534 225 aaKnown RBP9.98□□□□□ -0.81
NUP85-224ENST00000583948 HTR3AP46098 478 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 PDLIM4P50479 330 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 CDH15P55291 814 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 FOXG1P55316 489 aaPredicted RBP9.98□□□□□ -0.81
NUP85-224ENST00000583948 FOXF1Q12946 379 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 CDK5R2Q13319 367 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 TOP3AQ13472 1001 aaPredicted RBP9.98□□□□□ -0.81
NUP85-224ENST00000583948 TMEM44Q2T9K0 475 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 MST1LQ2TV78 715 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 KCTD21Q4G0X4 260 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 RBM48Q5RL73 367 aaKnown RBP9.98□□□□□ -0.81
NUP85-224ENST00000583948 C6orf141Q5SZD1 244 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 C12orf73Q69YU5 71 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 OAFQ86UD1 273 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 OR51A7Q8NH64 312 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 HDAC2Q92769 488 aaKnown RBP9.98□□□□□ -0.81
NUP85-224ENST00000583948 FBXO17Q96EF6 278 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 DNAJA3Q96EY1 480 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 IL4I1Q96RQ9 567 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 TEX12Q9BXU0 123 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 POTEKPQ9BYX7 375 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 SLC19A3Q9BZV2 496 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 OR52D1Q9H346 318 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 PTGES2Q9H7Z7 377 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 SLC25A19Q9HC21 320 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 NGBQ9NPG2 151 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 MED17Q9NVC6 651 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 TVP23BQ9NYZ1 205 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
NUP85-224ENST00000583948 FAM157AC9JC47 383 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 LRRN3E7EW58 273 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 M0R1B8 84 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SLC1A7O00341 560 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SMAD9O15198 467 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 IGHV3-9P01782 118 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SMIM18P0DKX4 95 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ATP6V1B1P15313 513 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 IGHV1-2P23083 117 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 SFTPDP35247 375 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 RPS5P46782 204 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 CDK5Q00535 292 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ITGADQ13349 1161 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 BLMHQ13867 455 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ZBED5Q49AG3 693 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 HBMQ6B0K9 141 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ACSM5Q6NUN0 579 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 RPL13AP3Q6NVV1 102 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SLC27A4Q6P1M0 643 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SMARCD3Q6STE5 483 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 LRRC17Q8N6Y2 441 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 CLDN22Q8N7P3 220 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 TCEANCQ8N8B7 351 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ATP6V1C2Q8NEY4 427 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 TSPAN14Q8NG11 270 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 OR4Q3Q8NH05 313 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 OR2V1Q8NHB1 315 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 FBLIM1Q8WUP2 373 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 KTI12Q96EK9 354 aaPredicted RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 PLEKHA8Q96JA3 519 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SLC38A2Q96QD8 506 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SNX18Q96RF0 628 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 IFT27Q9BW83 186 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 HDHD5Q9BXW7 423 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 YTHDF1Q9BYJ9 559 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 MRPS26Q9BYN8 205 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 PRRG3Q9BZD7 231 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 LPAR2Q9HBW0 351 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 CLN6Q9NWW5 311 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 SCN3BQ9NY72 215 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 BLOC1S6Q9UL45 172 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 MCTS1Q9ULC4 181 aaKnown RBP9.97□□□□□ -0.81
NUP85-224ENST00000583948 SIGLEC7Q9Y286 467 aa9.97□□□□□ -0.81
NUP85-224ENST00000583948 TRAV36DV7A0A075B6V5 113 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 ZC3H12DA2A288 527 aaKnown RBP9.96□□□□□ -0.82
NUP85-224ENST00000583948 LYNX1G3V0Z9 82 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 XPNPEP2O43895 674 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 EFNA2O43921 213 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 MPZL2O60487 215 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 AHSA1O95433 338 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 LYNX1P0DP58 116 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 TFPIP10646 304 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 SLC6A6P31641 620 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
NUP85-224ENST00000583948 GIPRP48546 466 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 SLC9A3P48764 834 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 EGR4Q05215 589 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 SNAPC1Q16533 368 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 ZNF74Q16587 644 aa9.96□□□□□ -0.82
NUP85-224ENST00000583948 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
NUP85-224ENST00000583948 LAIR2Q6ISS4 152 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms