RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PRSS50Q9UI38 385 aa14.42□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ERRFI1Q9UJM3 462 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-228ENST00000583363 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDK5RAP3-228ENST00000583363 COA3Q9Y2R0 106 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RPL36Q9Y3U8 105 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-228ENST00000583363 WIPF3A6NGB9 483 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 SLC22A31A6NKX4 558 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CCL21O00585 134 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 IGHV3-9P01782 118 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 OPRM1P35372 400 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 NUDT6P53370 316 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 STK11Q15831 433 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RBM48Q5RL73 367 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 FBXW9Q5XUX1 488 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 B3GLCTQ6Y288 498 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 NCCRP1Q6ZVX7 275 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RND1Q92730 232 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 KISS1RQ969F8 398 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF837Q96EG3 531 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RBM24Q9BX46 236 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ULBP2Q9BZM5 246 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CRLF2Q9HC73 371 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 MRPS18AQ9NVS2 196 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 HAO2Q9NYQ3 351 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 UPB1Q9UBR1 384 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF629Q9UEG4 869 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 PROCRQ9UNN8 238 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 MYO7BQ6PIF6 2116 aa14.41□□□□□ -0.1
CDK5RAP3-228ENST00000583363 LRBAP50851 2863 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 SLC1A7O00341 560 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 XPNPEP2O43895 674 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 KRT33AO76009 404 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CNOT4O95628 575 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CCDC159P0C7I6 412 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CD8BP10966 210 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 GSTT1P30711 240 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 SLC15A1P46059 708 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 CENPAP49450 140 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 BLVRAP53004 296 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RPS7P62081 194 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ROR2Q01974 943 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 UBE2J2Q8N2K1 259 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF786Q8N393 782 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF610Q8N9Z0 462 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 GGHQ92820 318 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZMYND19Q96E35 227 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 UGT2A1Q9Y4X1 527 aa14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 INTS1Q8N201 2190 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-228ENST00000583363 A0A1B0GUH1 482 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF587BE7ETH6 402 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FAM20BO75063 409 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SMNDC1O75940 238 aaKnown RBP eCLIP14.39□□□□□ -0.117e-6■□□□□ 8.6
CDK5RAP3-228ENST00000583363 GPANK1O95872 356 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SCG5P05408 212 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 DBTP11182 482 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CRHBPP24387 322 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LAP3P28838 519 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MTNR1AP48039 350 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 HSF2Q03933 536 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF91Q05481 1191 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FAPQ12884 760 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CEACAM16Q2WEN9 425 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FOXL2NBQ6ZUU3 175 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GLB1L2Q8IW92 636 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF511Q8NB15 262 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OR6K6Q8NGW6 343 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 RNFT2Q96EX2 444 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ALKBH3Q96Q83 286 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NR1H4Q96RI1 486 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PIGMQ9H3S5 423 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MARCH7Q9H992 704 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SCN3BQ9NY72 215 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MALT1Q9UDY8 824 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PSORS1C1Q9UIG5 152 aa14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TVP23AA6NH52 213 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MPZL1O95297 269 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TFP02787 698 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GAAP10253 952 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CDAP32320 146 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF84P51523 738 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CHN2P52757 468 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FOXG1P55316 489 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GLO1Q04760 184 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 KCNMB1Q16558 191 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 KLHL22Q53GT1 634 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ABHD12BQ7Z5M8 362 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LIX1LQ8IVB5 337 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LGALS12Q96DT0 336 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OPN3Q9H1Y3 402 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 DUSP21Q9H596 190 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SEC61A2Q9H9S3 476 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FKBP14Q9NWM8 211 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MRPL22Q9NWU5 206 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MYRFQ9Y2G1 1151 aa14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TPRKBQ9Y3C4 175 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms