RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 MED29Q9NX70 200 aa11.59□□□□□ -0.55
SS18-222ENST00000582792 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.59□□□□□ -0.55
SS18-222ENST00000582792 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
SS18-222ENST00000582792 SAMD4AQ9UPU9 718 aaKnown RBP11.59□□□□□ -0.55
SS18-222ENST00000582792 ARPC2O15144 300 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 PLPP2O43688 288 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 DNAJC8O75937 253 aaPredicted RBP11.58□□□□□ -0.56
SS18-222ENST00000582792 MPZL1O95297 269 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 SERPINA1P01009 418 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 SERPINA5P05154 406 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 CAMK2DQ13557 499 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 RAB39AQ14964 217 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 OR1Q1Q15612 314 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 NPTX1Q15818 432 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 NKPD1Q17RQ9 610 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ALKBH6Q3KRA9 238 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 PRR31Q5SQ13 230 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ULK3Q6PHR2 472 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ZNF584Q8IVC4 421 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 OR6T1Q8NGN1 323 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 OR6N1Q8NGY5 312 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 GEMIN6Q8WXD5 167 aaKnown RBP11.58□□□□□ -0.56
SS18-222ENST00000582792 RAB39BQ96DA2 213 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ASB9Q96DX5 294 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 SLC47A1Q96FL8 570 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 NSMCE2Q96MF7 247 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 EPYCQ99645 322 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 MCHR1Q99705 422 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 THTPAQ9BU02 230 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ASPNQ9BXN1 380 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 ESM1Q9NQ30 184 aa11.58□□□□□ -0.56
SS18-222ENST00000582792 IGLV3-9A0A075B6K5 115 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 A0A0B4J2E0 115 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 A0A0G2JMP0 313 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 A0A0X1KG70 313 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 A0A1B0GX12 115 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 ZNF726A6NNF4 738 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 C17orf100A8MU93 164 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 J3QLI3 93 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 M0R3H8 397 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 GSC2O15499 205 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 TPST2O60704 377 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 CDC14BO60729 498 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 DEAF1O75398 565 aaPredicted RBP11.57□□□□□ -0.56
SS18-222ENST00000582792 BCL10O95999 233 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 CLPTM1O96005 669 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 BGLAPP02818 100 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 THRBP10828 461 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 NCK1P16333 377 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 SELENOVP59797 346 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 CCL8P80075 99 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 MVKQ03426 396 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 PUDPQ08623 228 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 PMS2P3Q13401 168 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 PCGF3Q3KNV8 242 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 IFI44LQ53G44 452 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 AVPI1Q5T686 147 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 LCN8Q6JVE9 175 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
SS18-222ENST00000582792 TMEM154Q6P9G4 183 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 PIWIL3Q7Z3Z3 882 aaKnown RBP11.57□□□□□ -0.56
SS18-222ENST00000582792 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 FAM156AQ8NDB6 213 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 OR4M2Q8NGB6 313 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 OR4D11Q8NGI4 311 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 FGFBP3Q8TAT2 258 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 SLC6A7Q99884 636 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 WFDC6Q9BQY6 131 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 LRMDAQ9H2I8 198 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 HINT3Q9NQE9 182 aaKnown RBP11.57□□□□□ -0.56
SS18-222ENST00000582792 MRPL39Q9NYK5 338 aaKnown RBP11.57□□□□□ -0.56
SS18-222ENST00000582792 SELENONQ9NZV5 590 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 TAAR3PQ9P1P4 343 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 GPR160Q9UJ42 338 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 SH3GLB1Q9Y371 365 aa11.57□□□□□ -0.56
SS18-222ENST00000582792 SLC22A23A1A5C7 686 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 TRAPPC13A5PLN9 417 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 OR5F1O95221 314 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 ZNF682O95780 498 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 IGHV2-5P01817 119 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 PATE4P0C8F1 98 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 HOXB6P17509 224 aaKnown RBP11.56□□□□□ -0.56
SS18-222ENST00000582792 IFNA8P32881 189 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 CRYBB2P43320 205 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 CSNK1A1P48729 337 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 KLF3P57682 345 aaPredicted RBP11.56□□□□□ -0.56
SS18-222ENST00000582792 TEKQ02763 1124 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 ENTPD8Q5MY95 495 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 DCAF12L2Q5VW00 463 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 PXKQ7Z7A4 578 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 DHFR2Q86XF0 187 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 SLC22A24Q8N4F4 322 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 NANPQ8TBE9 248 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 PYURFQ96I23 114 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 TPD52L3Q96J77 140 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 MPP4Q96JB8 637 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 HSH2DQ96JZ2 352 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms