RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MFFQ9GZY8 342 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 NIPAL2Q9H841 368 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 NMRAL1Q9HBL8 299 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 UVRAGQ9P2Y5 699 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CTSFQ9UBX1 484 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 ADAM28Q9UKQ2 775 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 SNX6Q9UNH7 406 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 SIGLEC9Q9Y336 463 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 N6AMT1Q9Y5N5 214 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 ATP10AO60312 1499 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 ADAMTS13Q76LX8 1427 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 TRAV39A0A0B4J263 110 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 GCM2O75603 506 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 EIF3GO75821 320 aaKnown RBP eCLIP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 RAB3DO95716 219 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 APCSP02743 223 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 HEXBP07686 556 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 CT62P0C5K7 136 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 CD1CP29017 333 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 MAGEA8P43361 318 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 ARL9Q6T311 187 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 TEX43Q6ZNM6 134 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 CALHM1Q8IU99 346 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 PRSS58Q8IYP2 241 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 MIR7-3HGQ8N6C7 128 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 LRRC52Q8N7C0 313 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 HSD17B11Q8NBQ5 300 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 OR8U1Q8NH10 309 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 RTN4IP1Q8WWV3 396 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 COQ2Q96H96 371 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 CNN2Q99439 309 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 FMO2Q99518 471 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF717Q9BY31 904 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 PARP12Q9H0J9 701 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 SAV1Q9H4B6 383 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 AZI2Q9H6S1 392 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 FBXO6Q9NRD1 293 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF586Q9NXT0 402 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 CDH9Q9ULB4 789 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
SMCHD1-206ENST00000581631 TRAV26-1A0A087WT03 109 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 F6UB75 175 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 SPECC1L-ADORA2AF8WAN1 911 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 GOLGA8SH3BPF8 625 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 LGALS9O00182 355 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 ANGPT2O15123 496 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 RHOBTB1O94844 696 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 C1orf105O95561 183 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 C2P06681 752 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF138P52744 262 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF616Q08AN1 781 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 PON2Q15165 354 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 SPECC1LQ69YQ0 1117 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 ZFP1Q6P2D0 407 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 PLET1Q6UQ28 207 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 TMEM205Q6UW68 189 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 ASCL5Q7RTU5 278 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 TMEM135Q86UB9 458 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 FAM83FQ8NEG4 500 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 OR4K5Q8NGD3 323 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 LINC01560Q8TB33 94 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 FLYWCH2Q96CP2 140 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 PLEKHA8Q96JA3 519 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 PSKH2Q96QS6 385 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 FN3KRPQ9HA64 309 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 DDX19AQ9NUU7 478 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 EPS15L1Q9UBC2 864 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 CARHSP1Q9Y2V2 147 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 IKBKGQ9Y6K9 419 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 AP1M2Q9Y6Q5 423 aa1.43□□□□□ -2.18
SMCHD1-206ENST00000581631 A0A0U1RQV1 116 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 C17orf51A8MQB3 221 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 UBXN8O00124 270 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 YIF1AO95070 293 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 AIFM1O95831 613 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 IGHDP01880 384 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 DBTP11182 482 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 COL8A2P25067 703 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 VHLP40337 213 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 AQP2P41181 271 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 KIR3DL2P43630 455 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 CXCL12P48061 93 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 PRRX1P54821 245 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 FBXW4P57775 412 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 IFT88Q13099 833 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 EXOC3L2Q2M3D2 409 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 PTPN20Q4JDL3 420 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 SPIN3Q5JUX0 258 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 SLC25A24Q6NUK1 477 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 UNQ9165/PRO28630Q6UXU0 137 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 CIRBP-AS1Q8TBR5 109 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 SH3GL1Q99961 368 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 TEKT3Q9BXF9 490 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 PIGLQ9Y2B2 252 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 UBIAD1Q9Y5Z9 338 aa1.42□□□□□ -2.18
SMCHD1-206ENST00000581631 A0A1B0GVL5 298 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 VGLL3A8MV65 326 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 GOSR2O14653 212 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 CHST1O43916 411 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 SNNO75324 88 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms