RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 IL20RAQ9UHF4 553 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 WDR91A4D1P6 747 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MT-ATP6P00846 226 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 SERPINE1P05121 402 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MMP7P09237 267 aaPredicted RBP10.7□□□□□ -0.7
SS18-219ENST00000581570 ZCCHC18P0CG32 403 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 STOMP27105 288 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 PRKAR1BP31321 381 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 NCALDP61601 193 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 BTG1P62324 171 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MELKQ14680 651 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 HLXQ14774 488 aaPredicted RBP10.7□□□□□ -0.7
SS18-219ENST00000581570 OR1Q1Q15612 314 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 TAF9Q16594 264 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 NRN1LQ496H8 165 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 GTDC1Q4AE62 458 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 BTNL3Q6UXE8 466 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 LRRN1Q6UXK5 716 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 UNQ6126/PRO20091Q6UXV3 157 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 ZNF101Q8IZC7 436 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 ZNF283Q8N7M2 679 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 HIPK4Q8NE63 616 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MAL2Q969L2 176 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 PKNOX2Q96KN3 472 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 RSPO3Q9BXY4 272 aaPredicted RBP10.7□□□□□ -0.7
SS18-219ENST00000581570 SLC19A3Q9BZV2 496 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 C20orf27Q9GZN8 174 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MEAF6Q9HAF1 191 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 MSL2Q9HCI7 577 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
SS18-219ENST00000581570 KLHL21Q9UJP4 597 aa10.7□□□□□ -0.7
SS18-219ENST00000581570 A0A0B4J2E0 115 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 A0A1B0GX12 115 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 C5orf58C9J3I9 102 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 TGDSO95455 350 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 IL6P05231 212 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 WNT5AP41221 380 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 ETV4P43268 484 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 ZNF84P51523 738 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 ZMYND11Q15326 602 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 ZMAT1Q5H9K5 638 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 PABPC1L2AQ5JQF8 200 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 FAM205BPQ63HN1 556 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 COMTD1Q86VU5 262 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 OR10S1Q8NGN2 331 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 FAM110DQ8TAY7 271 aaPredicted RBP10.69□□□□□ -0.7
SS18-219ENST00000581570 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 SLC30A2Q9BRI3 323 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 TMEM43Q9BTV4 400 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 KCNN2Q9H2S1 579 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 MARCH7Q9H992 704 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 A4GALTQ9NPC4 353 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 LRCH1Q9Y2L9 728 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
SS18-219ENST00000581570 C5orf49A4QMS7 147 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 RNF13O43567 381 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 MGRN1O60291 552 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 TPST1O60507 370 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 TSPAN15O95858 294 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 WNT2P09544 360 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 ETS2P15036 469 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 MDH2P40926 338 aaKnown RBP10.68□□□□□ -0.7
SS18-219ENST00000581570 SLC1A6P48664 564 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 GDI2P50395 445 aaKnown RBP10.68□□□□□ -0.7
SS18-219ENST00000581570 CDH12P55289 794 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 CLRN1P58418 232 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 PPP1CBP62140 327 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 PAX2Q02962 417 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 PDCD1Q15116 288 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 RGNQ15493 299 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 MTX3Q5HYI7 312 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 DHRS4L2Q6PKH6 230 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 C1orf174Q8IYL3 243 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 KIRREL3Q8IZU9 778 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 POU5F2Q8N7G0 328 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 ABHD4Q8TB40 342 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 RAB40AQ8WXH6 277 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 VPS33AQ96AX1 596 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 THOC1Q96FV9 657 aaKnown RBP10.68□□□□□ -0.7
SS18-219ENST00000581570 SAMD8Q96LT4 415 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 SORT1Q99523 831 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 ARHGDIGQ99819 225 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 SSBP3Q9BWW4 388 aaPredicted RBP10.68□□□□□ -0.7
SS18-219ENST00000581570 CHIAQ9BZP6 476 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 RMND5AQ9H871 391 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms