RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PCBD1P61457 104 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 RPS7P62081 194 aaKnown RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 CSNK2BP67870 215 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 HSF2Q03933 536 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 OCLNQ16625 522 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 KLHL12Q53G59 568 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 PHYHD1Q5SRE7 291 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 KLHL24Q6TFL4 600 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 ZNF813Q6ZN06 617 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 MEPCEQ7L2J0 689 aaKnown RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 ZNF627Q7L945 461 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 BHLHA15Q7RTS1 189 aaPredicted RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 THAP5Q7Z6K1 395 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 CXorf67Q86X51 503 aaPredicted RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 OR10H5Q8NGA6 315 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 RHOXF1Q8NHV9 184 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
SKA2-205ENST00000580541 MUCL1Q96DR8 90 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 MUS81Q96NY9 551 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 CDADC1Q9BWV3 514 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 NELFAQ9H3P2 528 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 NDRG3Q9UGV2 375 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 A0A1W2PPL8 197 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 SH3D21A4FU49 640 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 WIPF3A6NGB9 483 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 FAM183AA6NL82 134 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 GLCEO94923 617 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 WNT11O96014 354 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 HRGP04196 525 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 CTLA4P16410 223 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 MSR1P21757 451 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 UBE2NP61088 152 aaKnown RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 ARF1P84077 181 aaKnown RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 TEKQ02763 1124 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 FMODQ06828 376 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 SGCAQ16586 387 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 C6orf52Q5T4I8 152 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 OR6K6Q8NGW6 343 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 HSD17B8Q92506 261 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 MYCBPQ99417 103 aaPredicted RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 TEAD3Q99594 435 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 RASSF1Q9NS23 344 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 WARS2Q9UGM6 360 aaKnown RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 KCNG2Q9UJ96 466 aa12.56□□□□□ -0.4
SKA2-205ENST00000580541 COA3Q9Y2R0 106 aaPredicted RBP12.56□□□□□ -0.4
SKA2-205ENST00000580541 SPTBN1Q01082 2364 aaKnown RBP12.55□□□□□ -0.4
SKA2-205ENST00000580541 IGLV1-36A0A0B4J1U3 117 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 C12orf71A8MTZ7 269 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 LYZL6O75951 148 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 ITGA5P08648 1049 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 EDNRAP25101 427 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 UGT2B10P36537 528 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 ATP6V1E1P36543 226 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 SORDQ00796 357 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 POU4F2Q12837 409 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 APOFQ13790 326 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 KCNMB1Q16558 191 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 SLC36A2Q495M3 483 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 C9orf135Q5VTT2 229 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 AADACL4Q5VUY2 407 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 KRT80Q6KB66 452 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 SYT9Q86SS6 491 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 WDFY1Q8IWB7 410 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 ENTHD1Q8IYW4 607 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 SLC22A24Q8N4F4 322 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 OR9Q1Q8NGQ5 310 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 TSSK2Q96PF2 358 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 HAO2Q9NYQ3 351 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 FBXL3Q9UKT7 428 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 RPL36Q9Y3U8 105 aaKnown RBP12.55□□□□□ -0.4
SKA2-205ENST00000580541 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
SKA2-205ENST00000580541 KLF2Q9Y5W3 355 aaPredicted RBP12.55□□□□□ -0.4
SKA2-205ENST00000580541 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 NKX2-6A6NCS4 301 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 RAD51DO75771 328 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 MYF6P23409 242 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 GSTT1P30711 240 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 HTR1FP30939 366 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 PYCR1P32322 319 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 ARR3P36575 388 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms