RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SH3PXD2BA1X283 911 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 A6NIZ1 184 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 MT-ND5P03915 603 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 F13BP05160 661 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 AQP2P41181 271 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 CRYBB2P43320 205 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RAP1BP61224 184 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RPL27P61353 136 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 PCBD1P61457 104 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RAP1AP62834 184 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RUNX1T1Q06455 604 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 ALG10Q5BKT4 473 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 LIPNQ5VXI9 398 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 CGB2Q6NT52 195 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 C8orf82Q6P1X6 216 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 SLC25A47Q6Q0C1 308 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 PFN4Q8NHR9 129 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 NABP1Q96AH0 204 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 BPIFA2Q96DR5 249 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RBP7Q96R05 134 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 RNF121Q9H920 327 aa12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 TMEFF2Q9UIK5 374 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-216ENST00000580419 NBEAL1Q6ZS30 2694 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 LRP5LA4QPB2 252 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 CCDC22O60826 627 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 HPXP02790 462 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 CST2P09228 141 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 COX5BP10606 129 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 ANPEPP15144 967 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 APLNRP35414 380 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 PRKCDQ05655 676 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 TRAM2Q15035 370 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 SNX33Q8WV41 574 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 ZFAND2BQ8WV99 257 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 ACOT11Q8WXI4 607 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 SOX7Q9BT81 388 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
SMARCE1-216ENST00000580419 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 A0A1W2PPW3 197 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 KRT34O76011 436 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 IFNW1P05000 195 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 STOMP27105 288 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 OR1E2P47887 323 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 NKPD1Q17RQ9 610 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 MBNL2Q5VZF2 373 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TMPRSS11FQ6ZWK6 438 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 GLCCI1Q86VQ1 547 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 PAQR4Q8N4S7 273 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 SYT14Q8NB59 555 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 HDAC2Q92769 488 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 CCNB1IP1Q9NPC3 277 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 MAN2C1Q9NTJ4 1040 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TAAR3PQ9P1P4 343 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
SMARCE1-216ENST00000580419 TANC2Q9HCD6 1990 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 TRAV20A0A0B4J274 112 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 J3QW42 95 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 PRSS23O95084 383 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 SAGP10523 405 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 TNFRSF1BP20333 461 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 COL8A2P25067 703 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 IL2RGP31785 369 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 SEC24CP53992 1094 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 HSF2Q03933 536 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 FHL1Q13642 323 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 LRRC23Q53EV4 343 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 CBLL1Q75N03 491 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-216ENST00000580419 NDEL1Q9GZM8 345 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms