RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 POU2F3Q9UKI9 436 aa10.06□□□□□ -0.8
ERBB2-208ENST00000578630 IGKV1D-43A0A0B4J1Z2 117 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 A0A1W2PPL8 197 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 BHLHE40O14503 412 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 SOX14O95416 240 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 IGKV3-15P01624 115 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 LOXP28300 417 aaPredicted RBP10.05□□□□□ -0.8
ERBB2-208ENST00000578630 LAP3P28838 519 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 CDAP32320 146 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 PTDSS1P48651 473 aaKnown RBP10.05□□□□□ -0.8
ERBB2-208ENST00000578630 DAPP51397 102 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 KRTAP10-9P60411 292 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 PCBD1P61457 104 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 TUBA1BP68363 451 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 TUBA4AP68366 448 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 PLP2Q04941 152 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.05□□□□□ -0.8
ERBB2-208ENST00000578630 GINS1Q14691 196 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 SLC36A3Q495N2 470 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 ADAM5Q6NVV9 412 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 SLC27A4Q6P1M0 643 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 SEZ6L2Q6UXD5 910 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 PTCHD4Q6ZW05 846 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 TUBA1AQ71U36 451 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 MDP1Q86V88 176 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 GLB1L2Q8IW92 636 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 ICA1LQ8NDH6 482 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 TMEM204Q9BSN7 226 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 PLA2G12AQ9BZM1 189 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 NUAK2Q9H093 628 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 S100A14Q9HCY8 104 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 CCNB1IP1Q9NPC3 277 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 REV1Q9UBZ9 1251 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 ENOPH1Q9UHY7 261 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 B9D1Q9UPM9 204 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 COA3Q9Y2R0 106 aaPredicted RBP10.05□□□□□ -0.8
ERBB2-208ENST00000578630 UGT2A1Q9Y4X1 527 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 FKBP7Q9Y680 259 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 CENPEQ02224 2701 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 NOTCH2Q04721 2471 aa10.05□□□□□ -0.8
ERBB2-208ENST00000578630 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CRYBG3Q68DQ2 2970 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 IQCMA0A1B0GVH7 501 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 RIIAD1A6NNX1 92 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 C12orf71A8MTZ7 269 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 BAG2O95816 211 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 PLAUP00749 431 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 IGLV1-44P01699 117 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 IGFBP1P08833 259 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CST2P09228 141 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 PATE4P0C8F1 98 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CTLA4P16410 223 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 MSR1P21757 451 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 IDH3GP51553 393 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CRISP1P54107 249 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 ESRRGP62508 458 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 GLO1Q04760 184 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 NPRL3Q12980 569 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 ETFDHQ16134 617 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 FAHD1Q6P587 224 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 C20orf204Q6ZNR8 217 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 FOXL2NBQ6ZUU3 175 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 NPEPL1Q8NDH3 523 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 SDR9C7Q8NEX9 313 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 OR8D4Q8NGM9 314 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 OR1J2Q8NGS2 313 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 OR2T4Q8NH00 348 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 PKP2Q99959 881 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 RBM4BQ9BQ04 359 aaKnown RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 RBM4Q9BWF3 364 aaKnown RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 C1orf198Q9H425 327 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 UBTD1Q9HAC8 227 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 KRT84Q9NSB2 600 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CISD1Q9NZ45 108 aaKnown RBP10.04□□□□□ -0.8
ERBB2-208ENST00000578630 SPEF1Q9Y4P9 236 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 TIMM10BQ9Y5J6 103 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 ATP23Q9Y6H3 246 aa10.04□□□□□ -0.8
ERBB2-208ENST00000578630 CELSR2Q9HCU4 2923 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 OR6C68A6NDL8 312 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 H3BNX3 289 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 HS3ST1O14792 307 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 HLA-DQA2P01906 255 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 TP53P04637 393 aaPredicted RBP10.03□□□□□ -0.8
ERBB2-208ENST00000578630 SERPINA5P05154 406 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 CECR9P0C854 216 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 ZNF3P17036 446 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 PAICSP22234 425 aaKnown RBP10.03□□□□□ -0.8
ERBB2-208ENST00000578630 DNASE1P24855 282 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 GRK5P34947 590 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 LSM6P62312 80 aaKnown RBP10.03□□□□□ -0.8
ERBB2-208ENST00000578630 HSF2Q03933 536 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 KEAP1Q14145 624 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 RAB39AQ14964 217 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 PGGHGQ32M88 737 aa10.03□□□□□ -0.8
ERBB2-208ENST00000578630 ZNF672Q499Z4 452 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms