RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 DUX4Q9UBX2 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 AHCTF1Q8WYP5 2266 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 SDK2Q58EX2 2172 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 SOCS6O14544 535 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 EEF1E1O43324 174 aaKnown RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 NCR1O76036 304 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 NDUFB2O95178 105 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 PPP1R3DO95685 299 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 UMODP07911 640 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 NFYAP23511 347 aaPredicted RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 GIFP27352 417 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 PITPNBP48739 271 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 CCDC157Q569K6 752 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ARHGAP11AQ6P4F7 1023 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 CACNG6Q9BXT2 260 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 TMPRSS13Q9BYE2 586 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ADAM19Q9H013 955 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ZNF337Q9Y3M9 751 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 EML6Q6ZMW3 1958 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 C9J4A7 227 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 PRR23D1E9PI22 279 aaPredicted RBP12.46□□□□□ -0.41
RNF43-202ENST00000577625 IGHA1P01876 353 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 LIMS3P0CW19 117 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 LIMS4P0CW20 117 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 PRR23D2P0DMB1 279 aaPredicted RBP12.46□□□□□ -0.41
RNF43-202ENST00000577625 CD96P40200 585 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 RFC3P40938 356 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 ERVK-25P63136 954 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.41
RNF43-202ENST00000577625 PCOLCEQ15113 449 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 LYPD4Q6UWN0 246 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.41
RNF43-202ENST00000577625 JAZF1Q86VZ6 243 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 OR56B4Q8NH76 319 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 LIPHQ8WWY8 451 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 JAM3Q9BX67 310 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 AKAP7Q9P0M2 348 aaPredicted RBP12.46□□□□□ -0.41
RNF43-202ENST00000577625 CHRNA9Q9UGM1 479 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 LOXL2Q9Y4K0 774 aa12.46□□□□□ -0.41
RNF43-202ENST00000577625 TMEM82A0PJX8 343 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 PMS2P1A4D2B8 440 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 LRRN3E7EW58 273 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 GMFGO60234 142 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.42
RNF43-202ENST00000577625 TFP02787 698 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 RLN2P04090 185 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 ZNF3P17036 446 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 CLDN6P56747 220 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 FBXW4P57775 412 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.42
RNF43-202ENST00000577625 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.42
RNF43-202ENST00000577625 SLC36A2Q495M3 483 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 OR5W2Q8NH69 310 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 EDEM2Q9BV94 578 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 RNF32Q9H0A6 362 aa12.46□□□□□ -0.42
RNF43-202ENST00000577625 PTRH2Q9Y3E5 179 aaKnown RBP12.46□□□□□ -0.42
RNF43-202ENST00000577625 SLC22A31A6NKX4 558 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 MCRIP1C9JLW8 97 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 J3QRE1 110 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 HPP00738 406 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 IFNGP01579 166 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 S100A8P05109 93 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 ACAA1P09110 424 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 PAICSP22234 425 aaKnown RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 TACR3P29371 465 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 NOS3P29474 1203 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 S100A11P31949 105 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 SRP9P49458 86 aaKnown RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 TOMM34Q15785 309 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 OR2G6Q5TZ20 316 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 NUP54Q7Z3B4 507 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 TOMM5Q8N4H5 51 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 C12orf45Q8N5I9 185 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 SUMF1Q8NBK3 374 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 OR5L2Q8NGL0 311 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 C7orf50Q9BRJ6 194 aaKnown RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 ZNF649Q9BS31 505 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 HCAR1Q9BXC0 346 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 MED20Q9H944 212 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 ZNF593O00488 134 aaPredicted RBP12.45□□□□□ -0.42
RNF43-202ENST00000577625 CDC40O60508 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF43-202ENST00000577625 PPP3CBP16298 524 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 PGCP20142 388 aa12.45□□□□□ -0.42
RNF43-202ENST00000577625 ITPKBP27987 946 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms