RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
RPAIN-214ENST00000574003 LOC100289279A0A1B0GTE1 492 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 A0A1W2PPW3 197 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 EFCAB9A8MZ26 197 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 M0R233 179 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 NDUFS8O00217 210 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 IMPA2O14732 288 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 WNT9BO14905 357 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 SYNGR3O43761 229 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 MGRN1O60291 552 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 LMX1BO60663 402 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 LILRA1O75019 489 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 NCR1O76036 304 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 FARS2O95363 451 aaKnown RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 IGF2P01344 180 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 LCKP06239 509 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 CCNOP22674 350 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 RBMXP38159 391 aaKnown RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF133P52736 654 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 RPL27P61353 136 aaKnown RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 HSF2Q03933 536 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 PRKCDQ05655 676 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 DBPQ10586 325 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 CCNIQ14094 377 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 TRAM2Q15035 370 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 SLC36A2Q495M3 483 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 TMEM255AQ5JRV8 349 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 ELFN2Q5R3F8 820 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 SPATA46Q5T0L3 261 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 C10orf128Q5T292 105 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF730Q6ZMV8 503 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF786Q8N393 782 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 YIPF5Q969M3 257 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 HOPXQ9BPY8 73 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-214ENST00000574003 NARFLQ9H6Q4 476 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 TAAR3PQ9P1P4 343 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 SLC7A8Q9UHI5 535 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 ADAM18Q9Y3Q7 739 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 SPEF1Q9Y4P9 236 aa9.71□□□□□ -0.86
RPAIN-214ENST00000574003 LOC100509620A0A075B734 347 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 A0A1W2PPL8 197 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF23P17027 643 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 LAP3P28838 519 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 LSP1P33241 339 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 MSX2P35548 267 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 WNT5AP41221 380 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 MAGEB1P43366 347 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 SLC9A3P48764 834 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 GZMKP49863 264 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 PSG4Q00888 419 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 RIN1Q13671 783 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 RGS7BPQ6MZT1 257 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 PODNL1Q6PEZ8 512 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 UGT2A3Q6UWM9 527 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 HACD2Q6Y1H2 254 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 MBOAT2Q6ZWT7 520 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 OAFQ86UD1 273 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF519Q8TB69 540 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ACOT11Q8WXI4 607 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 FAM46AQ96IP4 442 aaKnown RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 Q96M85 177 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 WNT5BQ9H1J7 359 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 NMNAT1Q9HAN9 279 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-214ENST00000574003 SIAEQ9HAT2 523 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 EMC7Q9NPA0 242 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 CCNB1IP1Q9NPC3 277 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ADA2Q9NZK5 511 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ABCD2Q9UBJ2 740 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 IL20RAQ9UHF4 553 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 AP3M1Q9Y2T2 418 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 ENPP4Q9Y6X5 453 aa9.7□□□□□ -0.86
RPAIN-214ENST00000574003 TRBV4-1A0A0J9YWV2 114 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 IQCMA0A1B0GVH7 501 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 SNX3O60493 162 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 CDC14BO60729 498 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 TGFAP01135 160 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 IGHMP01871 453 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 ERCC1P07992 297 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 GIFP27352 417 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 IFNA8P32881 189 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 MPV17P39210 176 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 UCP2P55851 309 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 RPS23P62266 143 aaKnown RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 MRPS34P82930 218 aaKnown RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 SEC23BQ15437 767 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 NKPD1Q17RQ9 610 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 TBC1D28Q2M2D7 210 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 GLYATQ6IB77 296 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 CXXC5Q7LFL8 322 aaKnown RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF101Q8IZC7 436 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 SLC7A13Q8TCU3 470 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 RASD2Q96D21 266 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 ALG12Q9BV10 488 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 BEX2Q9BXY8 128 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 MYOZ1Q9NP98 299 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-214ENST00000574003 ARL8BQ9NVJ2 186 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 NDUFAF4Q9P032 175 aa9.69□□□□□ -0.86
RPAIN-214ENST00000574003 FBXL3Q9UKT7 428 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms