RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 DHHO43323 396 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 GAAP10253 952 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 GABRA1P14867 456 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF823P16415 610 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 PTGER4P35408 488 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 GUCA1AP43080 201 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ENTPD1P49961 510 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-209ENST00000573474 TEX30Q5JUR7 227 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 PHYHD1Q5SRE7 291 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF322Q6U7Q0 402 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-209ENST00000573474 GPR137CQ8N3F9 429 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 GMPPAQ96IJ6 420 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-209ENST00000573474 MGLLQ99685 303 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ULBP2Q9BZM5 246 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 FAM192AQ9GZU8 254 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ISYNA1Q9NPH2 558 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 LAMP5Q9UJQ1 280 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 CLEC4AQ9UMR7 237 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 COPS3Q9UNS2 423 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 A0A1W2PPL8 197 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 TMCC2O75069 709 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 UPK3AO75631 287 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 MPZL1O95297 269 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 MT-ND5P03915 603 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 HOXD4P09016 255 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 CAPZA2P47755 286 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF84P51523 738 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 TDGF1P3P51864 188 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ACTA2P62736 377 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ACTG2P63267 376 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ADAM8P78325 824 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 PCK2Q16822 640 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ARMCX4Q5H9R4 360 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 RIPPLY2Q5TAB7 128 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 OR2G6Q5TZ20 316 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 NSUN5P2Q63ZY6 315 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 C19orf48Q6RUI8 117 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 FOXL2NBQ6ZUU3 175 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 DPY19L4Q7Z388 723 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF485Q8NCK3 441 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 OR10H5Q8NGA6 315 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SPRYD4Q8WW59 207 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 C11orf40Q8WZ69 217 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SLX1AQ9BQ83 275 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 RBM24Q9BX46 236 aaKnown RBP12.1□□□□□ -0.47
CCDC40-209ENST00000573474 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SLCO5A1Q9H2Y9 848 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 SEC61A2Q9H9S3 476 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 KCNG2Q9UJ96 466 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
CCDC40-209ENST00000573474 CD8B2A6NJW9 211 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 H3BSA7 217 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 J3QLW9 94 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 WDR1O75083 606 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 KRT33AO76009 404 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SCG5P05408 212 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 TPOP07202 933 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SPARCP09486 303 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF19P17023 458 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 ALOX5APP20292 161 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 AGTR1P30556 359 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CDAP32320 146 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CD79BP40259 229 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 ACSM1Q08AH1 577 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 MLLT11Q13015 90 aaPredicted RBP12.09□□□□□ -0.47
CCDC40-209ENST00000573474 STK11Q15831 433 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 MEP1BQ16820 701 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CDONQ4KMG0 1287 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SSX6Q7RTT6 188 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
CCDC40-209ENST00000573474 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SYS1Q8N2H4 156 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CPT1CQ8TCG5 803 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 THEM6Q8WUY1 208 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 SNX33Q8WV41 574 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 ASB17Q8WXJ9 295 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 APH1AQ96BI3 265 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 YIPF6Q96EC8 236 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 OPALINQ96PE5 141 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CDADC1Q9BWV3 514 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 GPR35Q9HC97 309 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 POLE4Q9NR33 117 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 BABAM2Q9NXR7 383 aa12.09□□□□□ -0.47
CCDC40-209ENST00000573474 CEPT1Q9Y6K0 416 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms