RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STAMBPO95630 424 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 H1F0P07305 194 aaKnown RBP14.87□□□□□ -0.03
SMG6-212ENST00000573153 USF1P22415 310 aaPredicted RBP14.87□□□□□ -0.03
SMG6-212ENST00000573153 GIFP27352 417 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 PDLIM4P50479 330 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 KRT72Q14CN4 511 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 SLC36A2Q495M3 483 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 THEM4Q5T1C6 240 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 TBPL2Q6SJ96 375 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 FOXL2NBQ6ZUU3 175 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 FAM86B1Q8N7N1 296 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 VRK1Q99986 396 aaPredicted RBP14.87□□□□□ -0.03
SMG6-212ENST00000573153 FUZQ9BT04 418 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 BPESC1Q9GZL8 116 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 YAE1D1Q9NRH1 226 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 ZNF346Q9UL40 294 aaKnown RBP14.87□□□□□ -0.03
SMG6-212ENST00000573153 CMAHPQ9Y471 501 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 TRAV27A0A087WT01 109 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 LOC390937A0A1W2PQ73 354 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 A6NIZ1 184 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 SNAP29O95721 258 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 ZNF16P17020 682 aaPredicted RBP14.86□□□□□ -0.03
SMG6-212ENST00000573153 CDAP32320 146 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 LIMS1P48059 325 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 CTXN1P60606 82 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 RAP1BP61224 184 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 RPS23P62266 143 aaKnown RBP14.86□□□□□ -0.03
SMG6-212ENST00000573153 RAP1AP62834 184 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 RIN1Q13671 783 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 TMEM53Q6P2H8 277 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 PODNL1Q6PEZ8 512 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 SLC16A14Q7RTX9 510 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 RNF148Q8N7C7 305 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 CPEB3Q8NE35 698 aaKnown RBP14.86□□□□□ -0.03
SMG6-212ENST00000573153 OR13C2Q8NGS9 318 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 OR51A7Q8NH64 312 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 TSPAN32Q96QS1 320 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 SLC7A8Q9UHI5 535 aa14.86□□□□□ -0.03
SMG6-212ENST00000573153 FAM32AQ9Y421 112 aaKnown RBP14.86□□□□□ -0.03
SMG6-212ENST00000573153 IGLV3-9A0A075B6K5 115 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 A8MV72 311 aaPredicted RBP14.85□□□□□ -0.03
SMG6-212ENST00000573153 AHCYL1O43865 530 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 LILRA1O75019 489 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 PTP4A3O75365 173 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 PTHP01270 115 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 CD14P08571 375 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 CCL2P13500 99 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ITGA2P17301 1181 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 MNAT1P51948 309 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 FXYD6P3P58550 94 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ERVS71-1P61550 626 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 MAD2L1BPQ15013 274 aaPredicted RBP14.85□□□□□ -0.03
SMG6-212ENST00000573153 ZBED5Q49AG3 693 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ELFN2Q5R3F8 820 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 C16orf89Q6UX73 402 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 FAM122BQ7Z309 247 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 IGFN1Q86VF2 1251 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ZNF786Q8N393 782 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ARIH2OSQ8N7S6 290 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 SLC30A7Q8NEW0 376 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 PYURFQ96I23 114 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 RBP7Q96R05 134 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 CCT8L2Q96SF2 557 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 GPX7Q96SL4 187 aaPredicted RBP14.85□□□□□ -0.03
SMG6-212ENST00000573153 CDRT15Q96T59 188 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 SYT3Q9BQG1 590 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 TPK1Q9H3S4 243 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 TMEM160Q9NX00 188 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 FZR1Q9UM11 496 aa14.85□□□□□ -0.03
SMG6-212ENST00000573153 ATRQ13535 2644 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 SLC22A23A1A5C7 686 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 NCR1O76036 304 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 SCG5P05408 212 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 ADRA2AP08913 450 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 TACSTD2P09758 323 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 IL2RGP31785 369 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 GPR4P46093 362 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 OMPP47874 163 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 GALK2Q01415 458 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 CD47Q08722 323 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 TOP3AQ13472 1001 aaPredicted RBP14.84□□□□□ -0.03
SMG6-212ENST00000573153 GGTLC2Q14390 218 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 FAM27BQ5VT28 67 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 RRM2BQ7LG56 351 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 NEU4Q8WWR8 484 aaPredicted RBP14.84□□□□□ -0.03
SMG6-212ENST00000573153 MSI2Q96DH6 328 aaKnown RBP14.84□□□□□ -0.03
SMG6-212ENST00000573153 PIMREGQ9BSJ6 248 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 NDEL1Q9GZM8 345 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 RAB1BQ9H0U4 201 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 SIGLEC7Q9Y286 467 aa14.84□□□□□ -0.03
SMG6-212ENST00000573153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMG6-212ENST00000573153 TRBV4-1A0A0J9YWV2 114 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 SH3PXD2BA1X283 911 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 LYNX1G3V0Z9 82 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 ARPC2O15144 300 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 SYNGR3O43761 229 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 FAM107AO95990 144 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 HPXP02790 462 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 TP53P04637 393 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms