RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 RAP1AP62834 184 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 IL5RAQ01344 420 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 ITGADQ13349 1161 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 CRMP1Q14194 572 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM201Q5SNT2 666 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 ADCK1Q86TW2 530 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM123Q8N131 208 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 C9orf106Q8NAJ2 232 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 SDR9C7Q8NEX9 313 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 OR4K13Q8NH42 304 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 HDAC2Q92769 488 aaKnown RBP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 PTP4A1Q93096 173 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 OR2M2Q96R28 347 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 IL4I1Q96RQ9 567 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 NMNAT3Q96T66 252 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 CCL19Q99731 98 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 EMC6Q9BV81 110 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 MRPL13Q9BYD1 178 aaKnown RBP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 FN3KQ9H479 309 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 HINT3Q9NQE9 182 aaKnown RBP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 AASSQ9UDR5 926 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 RCE1Q9Y256 329 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 SLC35F4A4IF30 521 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 GPR171O14626 319 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 TLX2O43763 284 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 MPZL2O60487 215 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 IFNGP01579 166 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 PGA4P0DJD7 388 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 PGA3P0DJD8 388 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 PAX1P15863 534 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 CLDN17P56750 224 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 TEKQ02763 1124 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 CDK5R2Q13319 367 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 MED21Q13503 144 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 OCLNQ16625 522 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 LEG1Q6P5S2 330 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 BCDIN3DQ7Z5W3 292 aaKnown RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 CNIH3Q8TBE1 160 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM158Q8WZ71 300 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
RPAIN-209ENST00000571558 LRCH1Q9Y2L9 728 aa12.09□□□□□ -0.47
RPAIN-209ENST00000571558 SLC22A23A1A5C7 686 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 FAM183AA6NL82 134 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 A8MXE2 369 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 CENPBD1B2RD01 187 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 H7C1C5 153 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 AHCYL1O43865 530 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 YES1P07947 543 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF3P17036 446 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 LCN6P62502 163 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 DBPQ10586 325 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-209ENST00000571558 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 PLBD1Q6P4A8 553 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 HDDC2Q7Z4H3 204 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 CPOQ8IVL8 374 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 PERPQ96FX8 193 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 GMPPAQ96IJ6 420 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-209ENST00000571558 PLEKHA8Q96JA3 519 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 LRR1Q96L50 414 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 MED20Q9H944 212 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 GLRX2Q9NS18 164 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 CLEC4AQ9UMR7 237 aa12.08□□□□□ -0.48
RPAIN-209ENST00000571558 ALPK2Q86TB3 2170 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 XKRYO14609 159 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 ENTPD6O75354 484 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 SLC2A5P22732 501 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 EDNRAP25101 427 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 AGTR1P30556 359 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 SELENOPP49908 381 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 SLC25A1P53007 311 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 CAMK2DQ13557 499 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 SMN1Q16637 294 aaKnown RBP12.07□□□□□ -0.48
RPAIN-209ENST00000571558 P4HA3Q7Z4N8 544 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 NOXO1Q8NFA2 376 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF582Q96NG8 517 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-209ENST00000571558 ALG12Q9BV10 488 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms