RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CXCR6O00574 342 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 MGRN1O60291 552 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 LMX1BO60663 402 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 IFI30P13284 250 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 GIFP27352 417 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 ALDH3B1P43353 468 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 YAP1P46937 504 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 CHN2P52757 468 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 HSF2Q03933 536 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 TAF11Q15544 211 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 C10orf128Q5T292 105 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 ARMC4Q5T2S8 1044 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 RGS7BPQ6MZT1 257 aaPredicted RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 CXXC5Q7LFL8 322 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 VTCN1Q7Z7D3 282 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 OFCC1Q8IZS5 231 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF786Q8N393 782 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 UBASH3BQ8TF42 649 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 LRMDAQ9H2I8 198 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 KCNN2Q9H2S1 579 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 TXNIPQ9H3M7 391 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 MS4A5Q9H3V2 200 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 SMURF2Q9HAU4 748 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 CCNB1IP1Q9NPC3 277 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 DUSP13Q9UII6 198 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF346Q9UL40 294 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 HIF3AQ9Y2N7 669 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 RTTNQ86VV8 2226 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NME4O00746 187 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NDUFAB1O14561 156 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 LILRA1O75019 489 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLC2A10O95528 541 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 SNAP29O95721 258 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 IGFBP1P08833 259 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 TSPAN19P0C672 248 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM157BP0CG42 384 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 CCL2P13500 99 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 HNF1AP20823 631 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NUDT2P50583 147 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF133P52736 654 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 SELENOVP59797 346 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 MRPS34P82930 218 aaKnown RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 FMODQ06828 376 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 MAD2L1BPQ15013 274 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 TRAM2Q15035 370 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 OCLNQ16625 522 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NKPD1Q17RQ9 610 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 IFI44LQ53G44 452 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM205BPQ63HN1 556 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 FKBP9P1Q75LS8 142 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 LRP11Q86VZ4 500 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 LRRC18Q8N456 261 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 OR1J2Q8NGS2 313 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 NSMAFQ92636 917 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 HDAC2Q92769 488 aaKnown RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM162AQ96A26 154 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 HSH2DQ96JZ2 352 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 SNX18Q96RF0 628 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 KCTD14Q9BQ13 255 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 ALG12Q9BV10 488 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 EFCAB1Q9HAE3 211 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 SIAEQ9HAT2 523 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 RHCGQ9UBD6 479 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 GPR160Q9UJ42 338 aa10.62□□□□□ -0.71
CTDNEP1-205ENST00000570828 TRAV27A0A087WT01 109 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 LRP5LA4QPB2 252 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 EFCAB9A8MZ26 197 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 J3KTA2 159 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 SERPINA1P01009 418 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 TGFAP01135 160 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 IGHMP01871 453 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 LCKP06239 509 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 TACSTD2P09758 323 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 TCN1P20061 433 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 IGFBP5P24593 272 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 APEX1P27695 318 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 CDAP32320 146 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 APLNRP35414 380 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 GSK3BP49841 420 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 RPL27P61353 136 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 RIN1Q13671 783 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 HACD2Q6Y1H2 254 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF730Q6ZMV8 503 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 OAFQ86UD1 273 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 CYP4Z1Q86W10 505 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 PAQR4Q8N4S7 273 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 ICA1LQ8NDH6 482 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 FNDC8Q8TC99 324 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 SNX33Q8WV41 574 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 ACOT11Q8WXI4 607 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms