RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 GATAD1Q8WUU5 269 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 DYRK2Q92630 601 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 CELF6Q96J87 481 aaKnown RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 ZNF75AQ96N20 296 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 MS4A4EQ96PG1 132 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 ZNF385DQ9H6B1 395 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 ATP13A3Q9H7F0 1226 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 MEPEQ9NQ76 525 aaPredicted RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD9-220ENST00000569794 TREX1Q9NSU2 369 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 PAK1IP1Q9NWT1 392 aaPredicted RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 USE1Q9NZ43 259 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 WRAP73Q9P2S5 460 aaPredicted RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 DUX4Q9UBX2 424 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 WARS2Q9UGM6 360 aaKnown RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 UBQLN1Q9UMX0 589 aaKnown RBP3.8□□□□□ -1.8
CHD9-220ENST00000569794 MYO15BQ96JP2 1530 aa3.8□□□□□ -1.8
CHD9-220ENST00000569794 CNTNAP1P78357 1384 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 TSPAN11A1L157 253 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 TMEM213A2RRL7 107 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 TVP23AA6NH52 213 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OR6C70A6NIJ9 312 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 F8VP50 259 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 H7C0C1 242 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 M0QXV9 152 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 CDC7O00311 574 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SULT1C2O00338 296 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 CCL21O00585 134 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 TYROBPO43914 113 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 EEDO75530 441 aaKnown RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 LYPD3O95274 346 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 DEXIO95424 95 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 FCGR3AP08637 254 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SLC35E2BP0CK96 405 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 PSKH1P11801 424 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 HSD17B1P14061 328 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OR1E1P30953 314 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 MAGEA2P43356 314 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 GDI2P50395 445 aaKnown RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 XKP51811 444 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 CLDN6P56747 220 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 FBXW4P57775 412 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 GPX6P59796 221 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 RND3P61587 244 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 DHODHQ02127 395 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 ZNF154Q13106 437 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 FASTKQ14296 549 aaKnown RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 CASP8Q14790 479 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SNCBQ16143 134 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 REP15Q6BDI9 236 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 FAHD1Q6P587 224 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 EMBQ6PCB8 327 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 LINC00336Q6ZUF6 198 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OR2T11Q8NH01 316 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OR4Q3Q8NH05 313 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 CXorf40AQ8TE69 158 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 PHF10Q8WUB8 498 aaKnown RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 IFT81Q8WYA0 676 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 RPEQ96AT9 228 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SEC22AQ96IW7 307 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 FAM218AQ96MZ4 157 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OXGR1Q96P68 337 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 RCHY1Q96PM5 261 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 OR8B4Q96RC9 309 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 TBX15Q96SF7 602 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 PITPNM3Q9BZ71 974 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 NXF3Q9H4D5 531 aaKnown RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 WDR41Q9HAD4 459 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SLC39A1Q9NY26 324 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 SLC2A6Q9UGQ3 507 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 C3orf18Q9UK00 162 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 ERVW-1Q9UQF0 538 aa3.79□□□□□ -1.8
CHD9-220ENST00000569794 PRG3Q9Y2Y8 225 aaPredicted RBP3.79□□□□□ -1.8
CHD9-220ENST00000569794 MROH7Q68CQ1 1323 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 A0A1W2PR80 420 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 TRABD2BA6NFA1 517 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 IGLON5A6NGN9 336 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 K7EN84 100 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 hCG_2039718K7EN88 272 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 TNFSF11O14788 317 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 TRMUO75648 421 aaKnown RBP3.78□□□□□ -1.8
CHD9-220ENST00000569794 RPP14O95059 124 aaKnown RBP3.78□□□□□ -1.8
CHD9-220ENST00000569794 LSM8O95777 96 aaKnown RBP3.78□□□□□ -1.8
CHD9-220ENST00000569794 HBE1P02100 147 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 WNT2P09544 360 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 HLA-DMAP28067 261 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 ACTR1BP42025 376 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 DNASE1L1P49184 302 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 ATP4BP51164 291 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 CEBPGP53567 150 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 CRYBA2P53672 197 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 LIM2P55344 173 aa3.78□□□□□ -1.8
CHD9-220ENST00000569794 RPS14P62263 151 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms