RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CLDN18P56856 261 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF85Q03923 595 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 SRYQ05066 204 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 RUNX1T1Q06455 604 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 EGR3Q06889 387 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 MRPL28Q13084 256 aaKnown RBP6.8□□□□□ -1.32
CDH13-214ENST00000569455 CAMK2DQ13557 499 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 GPR50Q13585 617 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 LY6DQ14210 128 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 SLC17A1Q14916 467 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF169Q14929 603 aaPredicted RBP6.8□□□□□ -1.32
CDH13-214ENST00000569455 HSPB2Q16082 182 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 CTF1Q16619 201 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 CDONQ4KMG0 1287 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 VASNQ6EMK4 673 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ABLIM2Q6H8Q1 611 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 SLC16A12Q6ZSM3 486 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 CREB3L2Q70SY1 520 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 TRILQ7L0X0 811 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 FCRLAQ7L513 359 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 KCTD20Q7Z5Y7 419 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 KLBQ86Z14 1044 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 TIGD4Q8IY51 512 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF454Q8N9F8 522 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 SYT14Q8NB59 555 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF485Q8NCK3 441 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 KBTBD8Q8NFY9 601 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 OR10H5Q8NGA6 315 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 OR6N1Q8NGY5 312 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 OR6N2Q8NGY6 317 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 NEIL3Q8TAT5 605 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNRF4Q8WWF5 429 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ASB17Q8WXJ9 295 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 INTS12Q96CB8 462 aaKnown RBP6.8□□□□□ -1.32
CDH13-214ENST00000569455 UCN2Q96RP3 112 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF649Q9BS31 505 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 TTYH2Q9BSA4 534 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 EMC6Q9BV81 110 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 MRPL13Q9BYD1 178 aaKnown RBP6.8□□□□□ -1.32
CDH13-214ENST00000569455 PRRG4Q9BZD6 226 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 DEFB127Q9H1M4 99 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZDHHC11Q9H8X9 412 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 NDUFB11Q9NX14 153 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 EMC3Q9P0I2 261 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 KLHL9Q9P2J3 617 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 LAMP5Q9UJQ1 280 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 STUB1Q9UNE7 303 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 RCE1Q9Y256 329 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 ZNF407Q9C0G0 2248 aa6.8□□□□□ -1.32
CDH13-214ENST00000569455 IGHV3-15A0A0B4J1V0 119 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 LOC100506127A0A0U1RQW1 187 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 TRIM64BA6NI03 449 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 H0YC42 278 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 J3QLW9 94 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ZNF593O00488 134 aaPredicted RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 CYTIPO60759 359 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 SLC43A1O75387 559 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ATE1O95260 518 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 SPARCP09486 303 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 FAM87AP0C7U9 286 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CPN1P15169 458 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ZNF19P17023 458 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CD53P19397 219 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 NR4A1P22736 598 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 LAP3P28838 519 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 GABRA5P31644 462 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CD79BP40259 229 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 GUCA1AP43080 201 aaPredicted RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 ENTPD1P49961 510 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 RIPPLY3P57055 190 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ADAM8P78325 824 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 FMODQ06828 376 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 RASGEF1BQ0VAM2 473 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 KLRB1Q12918 225 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 TRAM1Q15629 374 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 INAQ16352 499 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 SSX1Q16384 188 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 HIST3H3Q16695 136 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 LIPKQ5VXJ0 399 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CARD17Q5XLA6 110 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 RPUSD3Q6P087 351 aaKnown RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 KCTD18Q6PI47 426 aaPredicted RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 VASH1Q7L8A9 365 aaPredicted RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 AAED1Q7RTV5 226 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 DPY19L4Q7Z388 723 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ATCAYQ86WG3 371 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CDC20BQ86Y33 519 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 GLB1L2Q8IW92 636 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 PHC2Q8IXK0 858 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 SLC26A10Q8NG04 563 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 OTOSQ8NHW6 89 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ROBO4Q8WZ75 1007 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 C4orf36Q96KX1 117 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 COQ7Q99807 217 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 CHCHD6Q9BRQ6 235 aa6.79□□□□□ -1.32
CDH13-214ENST00000569455 ISG20L2Q9H9L3 353 aaKnown RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 EXOSC4Q9NPD3 245 aaKnown RBP6.79□□□□□ -1.32
CDH13-214ENST00000569455 B3GAT2Q9NPZ5 323 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms