RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 GPIP06744 558 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 UROSP10746 265 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 LAMP1P11279 417 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 BCKDHAP12694 445 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 OMGP23515 440 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 GCH1P30793 250 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 ARR3P36575 388 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 MAGEB1P43366 347 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CAPZA2P47755 286 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 POLR2HP52434 150 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 ELLP55199 621 aaPredicted RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 SH3BGRP55822 239 aaPredicted RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 GNG11P61952 73 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 MRPS11P82912 194 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 TXNL4AP83876 142 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 ARF1P84077 181 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 ROR2Q01974 943 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 BAMBIQ13145 260 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CEACAM7Q14002 265 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SEC23BQ15437 767 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 OR7A5Q15622 319 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 ALKBH6Q3KRA9 238 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 ARHGAP11BQ3KRB8 267 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 GALNTL6Q49A17 601 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 LIPMQ5VYY2 423 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 TMEM225Q6GV28 225 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CREB3L2Q70SY1 520 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 C16orf62Q7Z3J2 963 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 R3HCC1LQ7Z5L2 792 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 HMGN2P46Q86SG4 172 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 MDP1Q86V88 176 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CLEC4FQ8N1N0 589 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 ARFGAP2Q8N6H7 521 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 PNLDC1Q8NA58 520 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 SYT14Q8NB59 555 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SPATA4Q8NEY3 305 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 PSMA8Q8TAA3 256 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SFXN5Q8TD22 340 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 OR5P2Q8WZ92 322 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 NPIPB3Q92617 1050 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SLC25A28Q96A46 364 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 RAB39BQ96DA2 213 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CCT8L2Q96SF2 557 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 NAPGQ99747 312 aaPredicted RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 SF3B5Q9BWJ5 86 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 FUT8Q9BYC5 575 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 RAB17Q9H0T7 212 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 OSGIN1Q9UJX0 560 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SLC35A3Q9Y2D2 325 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 TMED7Q9Y3B3 224 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 PLXNB1O43157 2135 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 DUXAA6NLW8 204 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 G3V2L1 256 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 H3BQF6 201 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 RPL36A-HNRNPH2H7BZ11 118 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 LSM1O15116 133 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 CFLARO15519 480 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 SCN2BO60939 215 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 SEC14L2O76054 403 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 ACTL6BO94805 426 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 AK1P00568 194 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 IGHV2-5P01817 119 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 SNRPAP09012 282 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 LINC00032P0C843 101 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 ZNF35P13682 527 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 MATN1P21941 496 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 TACR3P29371 465 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 PCGF2P35227 344 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 SOAT1P35610 550 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 GLRXP35754 106 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 HPCAL1P37235 193 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 RAD52P43351 418 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 P2RY4P51582 365 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 KCNJ10P78508 379 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 CCL8P80075 99 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 LCN2P80188 198 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 PTGR1Q14914 329 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 LARS2Q15031 903 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 SLC9A3R2Q15599 337 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 SMN1Q16637 294 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 TIGD6Q17RP2 521 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 CEACAM16Q2WEN9 425 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 GLIPR1L2Q4G1C9 344 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 ARMCX4Q5H9R4 360 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 GKAP1Q5VSY0 366 aaPredicted RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 AP1ARQ63HQ0 302 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 TYW3Q6IPR3 259 aaKnown RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 TMEM65Q6PI78 240 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 ZNF66Q6ZN08 573 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 C17orf107Q6ZR85 190 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 DCDC5Q6ZRR9 648 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 ZNF771Q7L3S4 317 aaPredicted RBP4.75□□□□□ -1.65
CDH13-211ENST00000568770 C6orf120Q7Z4R8 191 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 LCA5Q86VQ0 697 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 EPHX4Q8IUS5 362 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 WDFY1Q8IWB7 410 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 KIF18AQ8NI77 898 aa4.75□□□□□ -1.65
CDH13-211ENST00000568770 CNOT9Q92600 299 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms