RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CLDN1O95832 211 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 PAICSP22234 425 aaKnown RBP10.07□□□□□ -0.8
KARS-207ENST00000566560 ZNF133P52736 654 aaPredicted RBP10.07□□□□□ -0.8
KARS-207ENST00000566560 ARF1P84077 181 aaKnown RBP10.07□□□□□ -0.8
KARS-207ENST00000566560 C12orf73Q69YU5 71 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 SLC25A47Q6Q0C1 308 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 KLHL24Q6TFL4 600 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 ZNF813Q6ZN06 617 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 C17orf78Q8N4C9 275 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 NPEPL1Q8NDH3 523 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 STEAP2Q8NFT2 490 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 OR9Q1Q8NGQ5 310 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 NRG4Q8WWG1 115 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 S100PBPQ96BU1 408 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 RDH12Q96NR8 316 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 RACGAP1Q9H0H5 632 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 VCX3BQ9H321 246 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 TMEM38BQ9NVV0 291 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 TVP23BQ9NYZ1 205 aa10.07□□□□□ -0.8
KARS-207ENST00000566560 A0A096LPE4 126 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 A0A1W2PPZ6 126 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 OR6C68A6NDL8 312 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 FAM183AA6NL82 134 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 SLC16A7O60669 478 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 KHDRBS3O75525 346 aaKnown RBP10.06□□□□□ -0.8
KARS-207ENST00000566560 CRABP1P29762 137 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 PEX19P40855 299 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 CDC42P60953 191 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 SNTB1Q13884 538 aaKnown RBP10.06□□□□□ -0.8
KARS-207ENST00000566560 GABRA6Q16445 453 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 SNAPC1Q16533 368 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 TBRG1Q3YBR2 411 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 OR7E24Q6IFN5 339 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 ANKRD16Q6P6B7 361 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 PROKR2Q8NFJ6 384 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 FAM81AQ8TBF8 368 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 HTRA1Q92743 480 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 TSSK2Q96PF2 358 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 PITX2Q99697 317 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 MED18Q9BUE0 208 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 HDHD5Q9BXW7 423 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 NUAK2Q9H093 628 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 OR10A4Q9H209 315 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 NELFAQ9H3P2 528 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 BRD7Q9NPI1 651 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 IMPAD1Q9NX62 359 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 UGT2A1Q9Y4X1 527 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 FKBP7Q9Y680 259 aa10.06□□□□□ -0.8
KARS-207ENST00000566560 PRR14LQ5THK1 2151 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 IGLV1-36A0A0B4J1U3 117 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 TUBAL3A6NHL2 446 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 OR5H1A6NKK0 313 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 PRR23D1E9PI22 279 aaPredicted RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 DCTN6O00399 190 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 DLGAP1O14490 977 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 PRKYO43930 277 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 FARS2O95363 451 aaKnown RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 PRR23D2P0DMB1 279 aaPredicted RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 PPP3CBP16298 524 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 IGFBP2P18065 325 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 CDAP32320 146 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 GGT2P36268 569 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 CAPZA2P47755 286 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 PTDSS1P48651 473 aaKnown RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 CENPAP49450 140 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 SLC25A1P53007 311 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 UBE2NP61088 152 aaKnown RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 GLO1Q04760 184 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 DBPQ10586 325 aaPredicted RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 ETFDHQ16134 617 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 FBXW10Q5XX13 1052 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 PLBD1Q6P4A8 553 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 CXXC5Q7LFL8 322 aaKnown RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 OR6V1Q8N148 313 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 ZNF555Q8NEP9 628 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 CYGBQ8WWM9 190 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 HRASLS5Q96KN8 279 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 FOXN4Q96NZ1 517 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 DDOQ99489 341 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 MED20Q9H944 212 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 SEC61A2Q9H9S3 476 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 HINT3Q9NQE9 182 aaKnown RBP10.05□□□□□ -0.8
KARS-207ENST00000566560 SLC17A5Q9NRA2 495 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 B9D1Q9UPM9 204 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 GMPPBQ9Y5P6 360 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 PKDREJQ9NTG1 2253 aa10.05□□□□□ -0.8
KARS-207ENST00000566560 A0A1W2PR80 420 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 SH3D21A4FU49 640 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 FAM171A2A8MVW0 826 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 GYPBP06028 91 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 GAAP10253 952 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 CLUP10909 449 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 SPI1P17947 270 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 NPR2P20594 1047 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms