RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ZNF726A6NNF4 738 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-209ENST00000566240 NUP155O75694 1391 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 CLPXO76031 633 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 POLR2MP0CAP2 368 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 IGKV1-13P0DP09 117 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 LAMC1P11047 1609 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 HPGDP15428 266 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 OR1G1P47890 313 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 MRPL19P49406 292 aaKnown RBP3.57□□□□□ -1.84
CNOT1-209ENST00000566240 CLDN8P56748 225 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ADARB1P78563 741 aaKnown RBP3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ITIH4Q14624 930 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 HERPUD1Q15011 391 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 TTC19Q6DKK2 380 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ANGPTL8Q6UXH0 198 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 RNF165Q6ZSG1 346 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 CMTM1Q8IZ96 169 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 OR1N2Q8NGR9 330 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 OR5B3Q8NH48 314 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ZNF502Q8TBZ5 544 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 TMEM54Q969K7 222 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ISG20Q96AZ6 181 aaKnown RBP3.57□□□□□ -1.84
CNOT1-209ENST00000566240 BCL7BQ9BQE9 202 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 ANKRD60Q9BZ19 345 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 TMEM165Q9HC07 324 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 CCL28Q9NRJ3 127 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 PLSCR3Q9NRY6 295 aa3.57□□□□□ -1.84
CNOT1-209ENST00000566240 PRDM15P57071 1507 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-209ENST00000566240 PZPP20742 1482 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 MAGI2Q86UL8 1455 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 RTEL1-TNFRSF6BF6WH68 1400 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 IGLV3-10A0A075B6K4 115 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 A0A0G2JN53 185 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 FAM231BA6NCW3 169 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 USP27XA6NNY8 438 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 HDAC3O15379 428 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 SLC31A2O15432 143 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 FAM189A1O60320 539 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 EIF4E2O60573 245 aaKnown RBP3.56□□□□□ -1.84
CNOT1-209ENST00000566240 LY6G6DO95868 133 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 SERPINA5P05154 406 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 HPNP05981 417 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 GIPP09681 153 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-209ENST00000566240 GKN3PP0CG01 181 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 ZNF250P15622 560 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 AQP6Q13520 282 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 FZD2Q14332 565 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 KLHL40Q2TBA0 621 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 CCDC14Q49A88 953 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 CAVIN4Q5BKX8 364 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 XKR4Q5GH76 650 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 RSBN1Q5VWQ0 802 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-209ENST00000566240 PLCXD3Q63HM9 321 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 LCN12Q6JVE5 192 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 IL34Q6ZMJ4 242 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 CAPSLQ8WWF8 208 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 NDRG1Q92597 394 aaKnown RBP3.56□□□□□ -1.84
CNOT1-209ENST00000566240 RASL11BQ9BPW5 248 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 LYRM4Q9HD34 91 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 HRASLS2Q9NWW9 162 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 AHSPQ9NZD4 102 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 CLN8Q9UBY8 286 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 GNPTGQ9UJJ9 305 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 SLC17A4Q9Y2C5 497 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 GOLT1BQ9Y3E0 138 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 BCORL1Q5H9F3 1711 aa3.56□□□□□ -1.84
CNOT1-209ENST00000566240 RNF17Q9BXT8 1623 aaKnown RBP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 MAP3K4Q9Y6R4 1608 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 TRPM2O94759 1503 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 NEO1Q92859 1461 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 MBD5Q9P267 1494 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 GLYATL1P3A0A0U1RQE8 302 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 A0A1B0GVI7 797 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 HAT1O14929 419 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 TNFSF13O75888 250 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CCNB2O95067 398 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 IGKV3-15P01624 115 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CSF3P09919 207 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 FOLR1P15328 257 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CD1EP15812 388 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 FUT3P21217 361 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 HTR1EP28566 365 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 AQP2P41181 271 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CDKN1BP46527 198 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CAV2P51636 162 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 IRF8Q02556 426 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 WDR43Q15061 677 aaKnown RBP eCLIP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 OTPQ5XKR4 325 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 TTC23LQ6PF05 361 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 PEX26Q7Z412 305 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 ZNF321PQ8N8H1 164 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 PRELID2Q8N945 189 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 OR2L5Q8NG80 312 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 OR2G3Q8NGZ4 309 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 LYPD6BQ8NI32 183 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 PIK3IP1Q96FE7 263 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms