RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 YIPF3Q9GZM5 350 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 GP6Q9HCN6 339 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 CLEC2DQ9UHP7 191 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ERRFI1Q9UJM3 462 aaPredicted RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 LSM2Q9Y333 95 aaKnown RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 CAB39Q9Y376 341 aaPredicted RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ALPK2Q86TB3 2170 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF724A8MTY0 619 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 LCKP06239 509 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 MRPL3P09001 348 aaKnown RBP16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 PTGS2P35354 604 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 CSNK1A1P48729 337 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 WNT4P56705 351 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 GALEQ14376 348 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 SF3B4Q15427 424 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 SPHARQ15513 63 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC25A47Q6Q0C1 308 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMPRSS11AQ6ZMR5 421 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 WDFY1Q8IWB7 410 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 TIGD4Q8IY51 512 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMEM123Q8N131 208 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMIGD2Q96BF3 282 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 SNRNP40Q96DI7 357 aaKnown RBP16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 GPR137Q96N19 417 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 INTS14Q96SY0 518 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF649Q9BS31 505 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 RERGLQ9H628 205 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 BCO1Q9HAY6 547 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 ISYNA1Q9NPH2 558 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 PARPBPQ9NWS1 579 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 TAS2R16Q9NYV7 291 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 GLTPQ9NZD2 209 aa16.92■□□□□ 0.3
CSPG4P13-201ENST00000565545 CACNA1DQ01668 2161 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 NBPF19A0A087WUL8 3843 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 FAM171A2A8MVW0 826 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC43A1O75387 559 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 CLDN1O95832 211 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 HRGP04196 525 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 PSMB9P28065 219 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 GP2P55259 537 aaKnown RBP16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 MED22Q15528 200 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 TIGD6Q17RP2 521 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 AAED1Q7RTV5 226 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 LHFPL3Q86UP9 236 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 GLB1L2Q8IW92 636 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF511Q8NB15 262 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR6N1Q8NGY5 312 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 MCHR2Q969V1 340 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 ASF1BQ9NVP2 202 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC5A6Q9Y289 635 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 COA3Q9Y2R0 106 aaPredicted RBP16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMEM14AQ9Y6G1 99 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 SHANK1Q9Y566 2161 aa16.91■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR6C65A6NJZ3 312 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC22A20A6NK97 555 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 AHRRA9YTQ3 701 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF670-ZNF695F2Z2N8 137 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 PHYHO14832 338 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 SELENOFO60613 162 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 HLA-DQA2P01906 255 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 TFP02787 698 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 NAA10P41227 235 aaPredicted RBP16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ACTA2P62736 377 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ACTG2P63267 376 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 FMODQ06828 376 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 C10orf128Q5T292 105 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 CARD17Q5XLA6 110 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ADGRE4PQ86SQ3 457 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ERI1Q8IV48 349 aaKnown RBP16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 MCEMP1Q8IX19 187 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 C20orf196Q8IYI0 205 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 FNDC9Q8TBE3 224 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ABHD3Q8WU67 409 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 MGLLQ99685 303 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ALG8Q9BVK2 526 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 WDR76Q9H967 626 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 B3GAT2Q9NPZ5 323 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 GLRX2Q9NS18 164 aa16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 FOXD3Q9UJU5 478 aaPredicted RBP16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 ING1Q9UK53 422 aaPredicted RBP16.9■□□□□ 0.3
CSPG4P13-201ENST00000565545 A0A1B0GTH9 108 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 WIPF3A6NGB9 483 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 YES1P07947 543 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 QDPRP09417 244 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 LAP3P28838 519 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF85Q03923 595 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 ACSM1Q08AH1 577 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 DBPQ10586 325 aaPredicted RBP16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 MLLT11Q13015 90 aaPredicted RBP16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 ETFDHQ16134 617 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 C3AR1Q16581 482 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 TEX30Q5JUR7 227 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF324BQ6AW86 544 aaPredicted RBP16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 CDC20BQ86Y33 519 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 SYS1Q8N2H4 156 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF454Q8N9F8 522 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 SLC26A10Q8NG04 563 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 DGCR14Q96DF8 476 aaKnown RBP16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 OR5M11Q96RB7 305 aa16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 KCNG2Q9UJ96 466 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms