RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 NDRG3Q9UGV2 375 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 LYZL6O75951 148 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 PAICSP22234 425 aaKnown RBP22.74■■□□□ 1.23
NME3-208ENST00000565379 GUCA1AP43080 201 aaPredicted RBP22.74■■□□□ 1.23
NME3-208ENST00000565379 LRRC36Q1X8D7 754 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 ACSM5Q6NUN0 579 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 CCDC36Q8IYA8 594 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 NPEPL1Q8NDH3 523 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 OR1K1Q8NGR3 316 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 FOXB1Q99853 325 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 SYT4Q9H2B2 425 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 OBP2BQ9NPH6 170 aa22.74■■□□□ 1.23
NME3-208ENST00000565379 SMPD3Q9NY59 655 aaPredicted RBP22.74■■□□□ 1.23
NME3-208ENST00000565379 NF1P21359 2839 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 SURF4O15260 269 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 KHDRBS3O75525 346 aaKnown RBP22.73■■□□□ 1.23
NME3-208ENST00000565379 NPR2P20594 1047 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 HOXC12P31275 282 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 GABRA6Q16445 453 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 TIMM23BQ5SRD1 257 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 ZNF362Q5T0B9 420 aaPredicted RBP22.73■■□□□ 1.23
NME3-208ENST00000565379 SLC37A3Q8NCC5 494 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 SDR9C7Q8NEX9 313 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 GRIP2Q9C0E4 1043 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 ACTR6Q9GZN1 396 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 PLEKHA6Q9Y2H5 1048 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 FKBP7Q9Y680 259 aa22.73■■□□□ 1.23
NME3-208ENST00000565379 H7C1C5 153 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 RAD51DO75771 328 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 EPXP11678 715 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 SLC25A1P53007 311 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 LCN6P62502 163 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 ARF1P84077 181 aaKnown RBP22.72■■□□□ 1.23
NME3-208ENST00000565379 DAZAP2Q15038 168 aaPredicted RBP22.72■■□□□ 1.23
NME3-208ENST00000565379 C12orf73Q69YU5 71 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 OR2T4Q8NH00 348 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 HSD17B8Q92506 261 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 DDOQ99489 341 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 RACGAP1Q9H0H5 632 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 FN3KQ9H479 309 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 MOV10Q9HCE1 1003 aaKnown RBP22.72■■□□□ 1.23
NME3-208ENST00000565379 ACANP16112 2415 aa22.72■■□□□ 1.23
NME3-208ENST00000565379 A0A1W2PPR1 153 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 SLC16A7O60669 478 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 FARS2O95363 451 aaKnown RBP22.71■■□□□ 1.23
NME3-208ENST00000565379 SLC2A10O95528 541 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 CCKARP32238 428 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 CENPAP49450 140 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 FOXG1P55316 489 aaPredicted RBP22.71■■□□□ 1.23
NME3-208ENST00000565379 MRPS34P82930 218 aaKnown RBP22.71■■□□□ 1.23
NME3-208ENST00000565379 FMODQ06828 376 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 SNAPC1Q16533 368 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 KRTAP21-3Q3LHN1 58 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 C9orf135Q5VTT2 229 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 TMEM236Q5W0B7 351 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 DPPA2Q7Z7J5 298 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 ZBTB46Q86UZ6 589 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 GALNT4Q8N4A0 578 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 BCL2L2Q92843 193 aaPredicted RBP22.71■■□□□ 1.23
NME3-208ENST00000565379 ZNF837Q96EG3 531 aaPredicted RBP22.71■■□□□ 1.23
NME3-208ENST00000565379 HRASLS5Q96KN8 279 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 NUAK2Q9H093 628 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 TOR3AQ9H497 397 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 TMEM38BQ9NVV0 291 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 TVP23BQ9NYZ1 205 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 ST6GALNAC2Q9UJ37 374 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 AMDHD2Q9Y303 409 aa22.71■■□□□ 1.23
NME3-208ENST00000565379 OR6C68A6NDL8 312 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 OR5H1A6NKK0 313 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 CDC42P60953 191 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 CRMP1Q14194 572 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 KLHL24Q6TFL4 600 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 ZNF813Q6ZN06 617 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 FOXL2NBQ6ZUU3 175 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 NSMAFQ92636 917 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 NINJ1Q92982 152 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 S100PBPQ96BU1 408 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 MUCL1Q96DR8 90 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 DACH2Q96NX9 599 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 FOXC2Q99958 501 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 RPRD1BQ9NQG5 326 aaKnown RBP22.7■■□□□ 1.22
NME3-208ENST00000565379 B9D1Q9UPM9 204 aa22.7■■□□□ 1.22
NME3-208ENST00000565379 ZNF469Q96JG9 3925 aaPredicted RBP22.7■■□□□ 1.22
NME3-208ENST00000565379 H0YJX3 145 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 SNAP29O95721 258 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 OR8G3PP0DMU2 310 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 CTLA4P16410 223 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 EPHA2P29317 976 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 POLR2IP36954 125 aaKnown RBP22.69■■□□□ 1.22
NME3-208ENST00000565379 BLVRAP53004 296 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 ZIK1Q3SY52 487 aaPredicted RBP22.69■■□□□ 1.22
NME3-208ENST00000565379 TBRG1Q3YBR2 411 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 GLB1L2Q8IW92 636 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 OR6V1Q8N148 313 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 ZNF555Q8NEP9 628 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 TRUB1Q8WWH5 349 aaKnown RBP22.69■■□□□ 1.22
NME3-208ENST00000565379 TMUB1Q9BVT8 246 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 NMNAT2Q9BZQ4 307 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 SIAEQ9HAT2 523 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 SLC17A5Q9NRA2 495 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms