RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IGHV3-15A0A0B4J1V0 119 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 IGKV1D-43A0A0B4J1Z2 117 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 TRBV2A0A0J9YWF9 115 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 FAM166BA8MTA8 275 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 PSMD9O00233 223 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 SMAD9O15198 467 aaKnown RBP17.42■□□□□ 0.38
CLN6-205ENST00000564846 ABHD16AO95870 558 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 SERPINA3P01011 423 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 OR8G3PP0DMU2 310 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 RPS27P42677 84 aaKnown RBP17.42■□□□□ 0.38
CLN6-205ENST00000564846 MAGEA5P43359 124 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 STARP49675 285 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 ZNF766Q5HY98 468 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 LIPNQ5VXI9 398 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 YIPF7Q8N8F6 280 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 FDCSPQ8NFU4 85 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 OR10D3Q8NH80 312 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 NEIL3Q8TAT5 605 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 ABHD4Q8TB40 342 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 RPS4Y2Q8TD47 263 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 S100ZQ8WXG8 99 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 SLC25A46Q96AG3 418 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 PLGRKTQ9HBL7 147 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 IKZF2Q9UKS7 526 aa17.42■□□□□ 0.38
CLN6-205ENST00000564846 GPRIN2O60269 458 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 SC5DO75845 299 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 AQP8O94778 261 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 PSKH1P11801 424 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 SDC2P34741 201 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 PSMB10P40306 273 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 SUCLG1P53597 346 aaKnown RBP17.41■□□□□ 0.38
CLN6-205ENST00000564846 PCK2Q16822 640 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 KCTD18Q6PI47 426 aaPredicted RBP17.41■□□□□ 0.38
CLN6-205ENST00000564846 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.41■□□□□ 0.38
CLN6-205ENST00000564846 NSMAFQ92636 917 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 OR8B4Q96RC9 309 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 C6orf62Q9GZU0 229 aaPredicted RBP17.41■□□□□ 0.38
CLN6-205ENST00000564846 HMG20AQ9NP66 347 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 ALPK2Q86TB3 2170 aa17.41■□□□□ 0.38
CLN6-205ENST00000564846 A0A075B6Q4 140 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CLDN25C9JDP6 229 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CXCL13O43927 109 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 UPK3AO75631 287 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 MPZL1O95297 269 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 LAP3P28838 519 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 EIF1AXP47813 144 aaKnown RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 TNFSF10P50591 281 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 ROM1Q03395 351 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 INSL4Q14641 139 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 MEP1BQ16820 701 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 RSPO4Q2I0M5 234 aaPredicted RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 CARD17Q5XLA6 110 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 SLC25A47Q6Q0C1 308 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 IGFL2Q6UWQ7 119 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 PAMR1Q6UXH9 720 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 SLC22A16Q86VW1 577 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CPNE4Q96A23 557 aaPredicted RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 MROQ9BYG7 248 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 NCKAP5O14513 1909 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CEP250Q9BV73 2442 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 GFRA3O60609 400 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 TMCC2O75069 709 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CELA3AP09093 270 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CLDN15P56746 228 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 PPIAP62937 165 aaKnown RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 EIF2B1Q14232 305 aaKnown RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 DEFB109BQ30KR1 87 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 ZNF679Q8IYX0 411 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 BORCS5Q969J3 196 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 MCHR2Q969V1 340 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 AMELYQ99218 206 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 BARHL1Q9BZE3 327 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 WDR12Q9GZL7 423 aaKnown RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 TPK1Q9H3S4 243 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 ACKR4Q9NPB9 350 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 AKIP1Q9NQ31 210 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 SLCO1C1Q9NYB5 712 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 CRNNQ9UBG3 495 aaPredicted RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 ING1Q9UK53 422 aaPredicted RBP17.4■□□□□ 0.38
CLN6-205ENST00000564846 PEX16Q9Y5Y5 336 aa17.4■□□□□ 0.38
CLN6-205ENST00000564846 MED12Q93074 2177 aa17.39■□□□□ 0.38
CLN6-205ENST00000564846 ACOT7O00154 380 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 CASKO14936 926 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 S100A5P33763 92 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 LHX2P50458 406 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 MXD1Q05195 221 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 ZNF846Q147U1 533 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 ACSM3Q53FZ2 586 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 CEACAM19Q7Z692 300 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.39■□□□□ 0.37
CLN6-205ENST00000564846 FAM109AQ8N4B1 249 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 OR10H5Q8NGA6 315 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 RNF166Q96A37 237 aaPredicted RBP17.39■□□□□ 0.37
CLN6-205ENST00000564846 PNPLA2Q96AD5 504 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 ZNF385AQ96PM9 386 aaKnown RBP17.39■□□□□ 0.37
CLN6-205ENST00000564846 OR2M2Q96R28 347 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 ABHD6Q9BV23 337 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 ELOVL3Q9HB03 270 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 GLTPQ9NZD2 209 aa17.39■□□□□ 0.37
CLN6-205ENST00000564846 CNTRLQ7Z7A1 2325 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms