RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PPP1R3BQ86XI6 285 aa14.77□□□□□ -0.05
LINC00554-201ENST00000564841 OR4S1Q8NGB4 309 aa14.77□□□□□ -0.05
LINC00554-201ENST00000564841 ROBO4Q8WZ75 1007 aa14.77□□□□□ -0.05
LINC00554-201ENST00000564841 CMTM3Q96MX0 182 aa14.77□□□□□ -0.05
LINC00554-201ENST00000564841 INSM2Q96T92 566 aaPredicted RBP14.77□□□□□ -0.05
LINC00554-201ENST00000564841 GATCO43716 136 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 CTAG2O75638 210 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 SPI1P17947 270 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 COL9A1P20849 921 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 MLC1Q15049 377 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 EXOSC6Q5RKV6 272 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 LCTLQ6UWM7 567 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 CD163Q86VB7 1156 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 OR7G2Q8NG99 324 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 ZC3H10Q96K80 434 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 NECAB3Q96P71 396 aaPredicted RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 RCC2Q9P258 522 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 EMC8O43402 210 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 CD8AP01732 235 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 SFTA3P0C7M3 94 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF14P17017 642 aaPredicted RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 PRAMEF17Q5VTA0 474 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 ENPP7Q6UWV6 458 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 GABRG1Q8N1C3 465 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 CLEC1AQ8NC01 280 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 SEC11CQ9BY50 192 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 C13orf42A0A1B0GVH6 325 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 GPR37O15354 613 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 FGF16O43320 207 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 LYPD3O95274 346 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 ITGB2P05107 769 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 DCNP07585 359 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 OR2T7P0C7T2 308 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 MRPS10P82664 201 aaKnown RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 DPTQ07507 201 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 SLC9A5Q14940 896 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 MLF2Q15773 248 aaPredicted RBP14.76□□□□□ -0.05
LINC00554-201ENST00000564841 DUSP5Q16690 384 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 OR2T27Q8NH04 317 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 ZCCHC10Q8TBK6 192 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 HDAC8Q9BY41 377 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 RHOFQ9HBH0 211 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 RPS10P5Q9NQ39 176 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 KLHDC2Q9Y2U9 406 aa14.76□□□□□ -0.05
LINC00554-201ENST00000564841 RAB3DO95716 219 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 CSF1P09603 554 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ACOT4Q8N9L9 421 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 OR56A1Q8NGH5 318 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 MOAP1Q96BY2 351 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 RRNAD1Q96FB5 475 aaKnown RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 IP6K3Q96PC2 410 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 RSPH9Q9H1X1 276 aaPredicted RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 SEMA6CQ9H3T2 930 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 TMEM74BQ9NUR3 256 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ATXN7L1Q9ULK2 861 aaPredicted RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ATG2AQ2TAZ0 1938 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 MUC3AQ02505 3323 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 MCIDASD6RGH6 385 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 PMS2P2O95744 297 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 FBP1P09467 338 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 CD79AP11912 226 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 PRKXP51817 358 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ARHGAP40Q5TG30 622 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ADAM5Q6NVV9 412 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 PGAP1Q75T13 922 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 WDSUB1Q8N9V3 476 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 INO80EQ8NBZ0 244 aaPredicted RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 STOML3Q8TAV4 291 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 ELF4Q99607 663 aaPredicted RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 PARP12Q9H0J9 701 aaKnown RBP14.75□□□□□ -0.05
LINC00554-201ENST00000564841 TMEM27Q9HBJ8 222 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 MED31Q9Y3C7 131 aa14.75□□□□□ -0.05
LINC00554-201ENST00000564841 A0A1B0GTI1 187 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 VEGFDO43915 354 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 CALCBP10092 127 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 CSNK2A2P19784 350 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 CD80P33681 288 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PRSS3P35030 304 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ACTA2P62736 377 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ACTG2P63267 376 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 RAB30Q15771 203 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 CDK20Q8IZL9 346 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 OR5K2Q8NHB8 316 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZBTB8AQ96BR9 441 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 RASD2Q96D21 266 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PIK3IP1Q96FE7 263 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF514Q96K75 400 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 MFRPQ9BY79 579 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 SLC17A9Q9BYT1 436 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 KRCC1Q9NPI7 259 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ASH2LQ9UBL3 628 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 A0A1W2PPH5 198 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 TMEM72A0PK05 275 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 METTL21EPA6NDL7 271 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 KIR2DL1P43626 348 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 POU3F4P49335 361 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 BTN3A2P78410 334 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 HGFACQ04756 655 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 AIMP2Q13155 320 aaKnown RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 SRSF5Q13243 272 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms