RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 FAM183AA6NL82 134 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 ATP6V1G2O95670 118 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 B4GALT1P15291 398 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 SH3BGRP55822 239 aaPredicted RBP10.92□□□□□ -0.66
KARS-204ENST00000564578 C4orf46Q504U0 113 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 SLX4IPQ5VYV7 408 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 ANKRD16Q6P6B7 361 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 GALNT4Q8N4A0 578 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 RIBC2Q9H4K1 309 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 SRA1Q9HD15 236 aaKnown RBP10.92□□□□□ -0.66
KARS-204ENST00000564578 TMEM38BQ9NVV0 291 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 ZNF224Q9NZL3 707 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 CRIM1Q9NZV1 1036 aa10.92□□□□□ -0.66
KARS-204ENST00000564578 RTTNQ86VV8 2226 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 FBN2P35556 2912 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 SCG5P05408 212 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 CLUP10909 449 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 NR2C1P13056 603 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 RAD23AP54725 363 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 TBRG1Q3YBR2 411 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 C12orf73Q69YU5 71 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 ZNF813Q6ZN06 617 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 FOXL2NBQ6ZUU3 175 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 C17orf78Q8N4C9 275 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 FOXN4Q96NZ1 517 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 SLC17A5Q9NRA2 495 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 ENOPH1Q9UHY7 261 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 B9D1Q9UPM9 204 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 SLC25A15Q9Y619 301 aa10.91□□□□□ -0.66
KARS-204ENST00000564578 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
KARS-204ENST00000564578 ROS1P08922 2347 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 SH3D21A4FU49 640 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 M0R129 80 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 PRKYO43930 277 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 MPZL1O95297 269 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 GPANK1O95872 356 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 HMGN1P05114 100 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 KIR2DL3P43628 341 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 MRPS34P82930 218 aaKnown RBP10.9□□□□□ -0.66
KARS-204ENST00000564578 NRN1LQ496H8 165 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 OTPQ5XKR4 325 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 KLHL24Q6TFL4 600 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
KARS-204ENST00000564578 P2RY8Q86VZ1 359 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 SKA3Q8IX90 412 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 OR9Q1Q8NGQ5 310 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 OR52N5Q8NH56 324 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 FGFBP3Q8TAT2 258 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 HSD17B8Q92506 261 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 HRASLS5Q96KN8 279 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 USB1Q9BQ65 265 aaKnown RBP10.9□□□□□ -0.66
KARS-204ENST00000564578 MED18Q9BUE0 208 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 RERGLQ9H628 205 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 MED20Q9H944 212 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 NDRG3Q9UGV2 375 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 COA3Q9Y2R0 106 aaPredicted RBP10.9□□□□□ -0.66
KARS-204ENST00000564578 FKBP7Q9Y680 259 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 UNC79Q9P2D8 2635 aa10.9□□□□□ -0.66
KARS-204ENST00000564578 RIIAD1A6NNX1 92 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 RENP00797 406 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 GYPBP06028 91 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 PPP3CBP16298 524 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 CRABP1P29762 137 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 ZNF84P51523 738 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 SNAPC1Q16533 368 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 HIST2H2BCQ6DN03 193 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 UBE2FQ969M7 185 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 ZC3HAV1LQ96H79 300 aaKnown RBP10.9□□□□□ -0.67
KARS-204ENST00000564578 RACGAP1Q9H0H5 632 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 SIAEQ9HAT2 523 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 HINT3Q9NQE9 182 aaKnown RBP10.9□□□□□ -0.67
KARS-204ENST00000564578 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.67
KARS-204ENST00000564578 B3GNT2Q9NY97 397 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 NDRG4Q9ULP0 352 aaKnown RBP10.9□□□□□ -0.67
KARS-204ENST00000564578 ORC6Q9Y5N6 252 aa10.9□□□□□ -0.67
KARS-204ENST00000564578 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
KARS-204ENST00000564578 IFNGP01579 166 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 HLA-HP01893 362 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 PATE4P0C8F1 98 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 GAAP10253 952 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 EPXP11678 715 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 ZNF3P17036 446 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 LAP3P28838 519 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 SLC25A1P53007 311 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 TUBA1BP68363 451 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 TUBA4AP68366 448 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
KARS-204ENST00000564578 FAM27BQ5VT28 67 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms