RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 IGHMP01871 453 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 TNFRSF1BP20333 461 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 GUCA1AP43080 201 aaPredicted RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 SEC24CP53992 1094 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 ALG10Q5BKT4 473 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 RNF113BQ8IZP6 322 aaKnown RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 RP9Q8TA86 221 aaKnown RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 NMD3Q96D46 503 aaKnown RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 TPD52L3Q96J77 140 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 TAAR3PQ9P1P4 343 aa12.85□□□□□ -0.35
SPG7-210ENST00000564409 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 EIF3KQ9UBQ5 218 aaKnown RBP12.85□□□□□ -0.35
SPG7-210ENST00000564409 A6NIZ1 184 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 LYNX1G3V0Z9 82 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 IFNW1P05000 195 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 LCKP06239 509 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 FAM157BP0CG42 384 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 LYNX1P0DP58 116 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 SAGP10523 405 aaPredicted RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 NAT2P11245 290 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 TCN1P20061 433 aaPredicted RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 COL8A2P25067 703 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 STOMP27105 288 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 IL2RGP31785 369 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 SLC9A3P48764 834 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 RAP1BP61224 184 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 PCBD1P61457 104 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 RAP1AP62834 184 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 MYBPC1Q00872 1141 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 CD47Q08722 323 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 TRAM2Q15035 370 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 TRIP10Q15642 601 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 PABPC1L2AQ5JQF8 200 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 GLCCI1Q86VQ1 547 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 ALDH16A1Q8IZ83 802 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 OFCC1Q8IZS5 231 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 LRRC18Q8N456 261 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 PAQR4Q8N4S7 273 aaPredicted RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 MOSPD2Q8NHP6 518 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 WACQ9BTA9 647 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 FNDC11Q9BVV2 318 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 ZNF275Q9NSD4 429 aaPredicted RBP12.84□□□□□ -0.35
SPG7-210ENST00000564409 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 A4GNTQ9UNA3 340 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 UGT2A1Q9Y4X1 527 aa12.84□□□□□ -0.35
SPG7-210ENST00000564409 H3BSA7 217 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 AHCYL1O43865 530 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 IFI30P13284 250 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 ANPEPP15144 967 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 DRD4P21917 467 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 SRP14P37108 136 aaKnown RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 LIPAP38571 399 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 ZNF718Q3SXZ3 478 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 CGB2Q6NT52 195 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 SLC25A47Q6Q0C1 308 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 SYT9Q86SS6 491 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 FAM156AQ8NDB6 213 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 GEMIN6Q8WXD5 167 aaKnown RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 HDAC2Q92769 488 aaKnown RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 HOPXQ9BPY8 73 aaPredicted RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 ANKRD19PQ9H560 264 aa12.83□□□□□ -0.36
SPG7-210ENST00000564409 CGGBP1Q9UFW8 167 aaPredicted RBP12.83□□□□□ -0.36
SPG7-210ENST00000564409 PPIHO43447 177 aaKnown RBP12.82□□□□□ -0.36
SPG7-210ENST00000564409 ICMTO60725 284 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CCDC22O60826 627 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 RP2O75695 350 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 SLC2A10O95528 541 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CLPTM1O96005 669 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CST2P09228 141 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CCL2P13500 99 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 ZNF32P17041 273 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 TUBG1P23258 451 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 GCH1P30793 250 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CRYBB2P43320 205 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 GDI2P50395 445 aaKnown RBP12.82□□□□□ -0.36
SPG7-210ENST00000564409 PRKCDQ05655 676 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CCNIQ14094 377 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 SGCAQ16586 387 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 HSP90B2PQ58FF3 399 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 FOXL2NBQ6ZUU3 175 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 OAFQ86UD1 273 aa12.82□□□□□ -0.36
SPG7-210ENST00000564409 CPEB3Q8NE35 698 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms