RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PABPC1L2AQ5JQF8 200 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 HDXQ7Z353 690 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 OR51F2Q8NH61 342 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 GTF3AQ92664 365 aaKnown RBP20.37■□□□□ 0.85
NME3-206ENST00000564252 HDAC2Q92769 488 aaKnown RBP20.37■□□□□ 0.85
NME3-206ENST00000564252 NABP1Q96AH0 204 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 ZNF583Q96ND8 569 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 STX18Q9P2W9 335 aaKnown RBP20.37■□□□□ 0.85
NME3-206ENST00000564252 TENM1Q9UKZ4 2725 aa20.37■□□□□ 0.85
NME3-206ENST00000564252 IGKV1D-43A0A0B4J1Z2 117 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 NPIPB13A6NJU9 1138 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 NPIPB4C9JG80 1138 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 CDC14BO60729 498 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 HSF2Q03933 536 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 LAPTM4AQ15012 233 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 MMEL1Q495T6 779 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 COQ5Q5HYK3 327 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 ERICH5Q6P6B1 374 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 ICA1LQ8NDH6 482 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 LRRC37BQ96QE4 947 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 METTL17Q9H7H0 456 aaPredicted RBP20.36■□□□□ 0.85
NME3-206ENST00000564252 VIPAS39Q9H9C1 493 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 SMURF2Q9HAU4 748 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 GRIP1Q9Y3R0 1128 aa20.36■□□□□ 0.85
NME3-206ENST00000564252 NPPAP01160 153 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 IGHV3-13P01766 116 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 THRBP10828 461 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 ZNF32P17041 273 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 CRYBB2P43320 205 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 FMODQ06828 376 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 MEX3DQ86XN8 651 aaKnown RBP20.35■□□□□ 0.85
NME3-206ENST00000564252 OR1J1Q8NGS3 322 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 KCNN2Q9H2S1 579 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 TXNIPQ9H3M7 391 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 MED31Q9Y3C7 131 aa20.35■□□□□ 0.85
NME3-206ENST00000564252 MRASO14807 208 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 PIP5K1CO60331 668 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 IFNA14P01570 189 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 STOMP27105 288 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 WNT5AP41221 380 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 GLO1Q04760 184 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 C10orf82Q8WW14 230 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 POM121L2Q96KW2 1035 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 OCEL1Q9H607 264 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 CCNB1IP1Q9NPC3 277 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 HIF3AQ9Y2N7 669 aa20.34■□□□□ 0.85
NME3-206ENST00000564252 LOC100509620A0A075B734 347 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 TRAV20A0A0B4J274 112 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 IGHV1-69-2A0A0G2JMI3 117 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 BBIP1A8MTZ0 92 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 VENTXO95231 258 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 CCNOP22674 350 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 TEKQ02763 1124 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 MVKQ03426 396 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 CD47Q08722 323 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 KLF10Q13118 480 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 MOGQ16653 247 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 CYBRD1Q53TN4 286 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 ALG10Q5BKT4 473 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 TMEM255AQ5JRV8 349 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 AVPI1Q5T686 147 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 SLC25A47Q6Q0C1 308 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 ZNF101Q8IZC7 436 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.33■□□□□ 0.85
NME3-206ENST00000564252 SEMA6DQ8NFY4 1073 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 NSMAFQ92636 917 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 ZNF665Q9H7R5 613 aa20.33■□□□□ 0.85
NME3-206ENST00000564252 A0A0A6YYJ9 748 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 DRD4P21917 467 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 PSG4Q00888 419 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 SGCAQ16586 387 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 LRRC23Q53EV4 343 aaPredicted RBP20.32■□□□□ 0.84
NME3-206ENST00000564252 USP51Q70EK9 711 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 G6PC2Q9NQR9 355 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 DECR2Q9NUI1 292 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 MRGBPQ9NV56 204 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 A4GNTQ9UNA3 340 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 CACNG2Q9Y698 323 aa20.32■□□□□ 0.84
NME3-206ENST00000564252 FAM220BPB1ANY3 271 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 DEAF1O75398 565 aaPredicted RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 PNPP00491 289 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 IGHMP01871 453 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 MT-ND5P03915 603 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 NR2C1P13056 603 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 KDELR2P33947 212 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 MPV17P39210 176 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 ERVK-25P63136 954 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 TOP3AQ13472 1001 aaPredicted RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 TAF11Q15544 211 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 TSTQ16762 297 aaKnown RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 SPATA46Q5T0L3 261 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 FAM27BQ5VT28 67 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 FAHD2BQ6P2I3 314 aaPredicted RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 C1orf229Q6ZS94 237 aaPredicted RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 CLDN22Q8N7P3 220 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 AKR7LQ8NHP1 331 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 IPCEF1Q8WWN9 437 aaPredicted RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 FAHD2AQ96GK7 314 aa20.31■□□□□ 0.84
NME3-206ENST00000564252 MARS2Q96GW9 593 aaKnown RBP20.31■□□□□ 0.84
NME3-206ENST00000564252 PRRC1Q96M27 445 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms