RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 IMPAD1Q9NX62 359 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 PAQR5Q9NXK6 330 aaPredicted RBP4.12□□□□□ -1.75
CDR2-203ENST00000563573 SCN3BQ9NY72 215 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 TVP23BQ9NYZ1 205 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 BAIAP2Q9UQB8 552 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 LRCH1Q9Y2L9 728 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 SLC6A5Q9Y345 797 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 CDH10Q9Y6N8 788 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 URB1O60287 2271 aaKnown RBP4.12□□□□□ -1.75
CDR2-203ENST00000563573 KIAA1549Q9HCM3 1950 aa4.12□□□□□ -1.75
CDR2-203ENST00000563573 ZZEF1O43149 2961 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MAP1BP46821 2468 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 TRAV27A0A087WT01 109 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TRGV5A0A0B4J1U4 118 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 A0A0G2JMM0 328 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 A0A1W2PPB8 328 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 A0A1W2PRG6 482 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 A0A1W2PRS3 328 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PINLYPA6NC86 204 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 KIR3DP1A8MWS1 328 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PRR23D1E9PI22 279 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 C11orf98E9PRG8 122 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 DLGAP1O14490 977 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 XKRYO14609 159 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 CDC42EP2O14613 210 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 IMPA2O14732 288 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TFECO14948 347 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 SEC14L5O43304 696 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 DNPH1O43598 174 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 EFNA2O43921 213 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 NPIPB7O75200 414 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 GLSO94925 669 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 SOX14O95416 240 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 NTN1O95631 604 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 IFNGP01579 166 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 BGLAPP02818 100 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 OPN1LWP04000 364 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 IL6RP08887 468 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ASAH2BP0C7U1 165 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PRR23D2P0DMB1 279 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 PTNP21246 168 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PAICSP22234 425 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 MST1P26927 711 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MPGP29372 298 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 GRPRP30550 384 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 GRK5P34947 590 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 GGT2P36268 569 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 POLR2IP36954 125 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 RFC3P40938 356 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MAGEA5P43359 124 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 DIO1P49895 249 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 LTBQ06643 244 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MYBPHQ13203 477 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PDK3Q15120 406 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 SF3B4Q15427 424 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDR2-203ENST00000563573 ETFDHQ16134 617 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 INAQ16352 499 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TMEM44Q2T9K0 475 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ALG10Q5BKT4 473 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 CMPK2Q5EBM0 449 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 RBM48Q5RL73 367 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 ZNF691Q5VV52 312 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MEDAGQ5VYS4 303 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TMEM236Q5W0B7 351 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 HBMQ6B0K9 141 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ACSM5Q6NUN0 579 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ZNF66Q6ZN08 573 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 Q6ZS92 163 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MEX3DQ86XN8 651 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 MARVELD2Q8N4S9 558 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 LRRC17Q8N6Y2 441 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TEX19Q8NA77 164 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 C9orf43Q8TAL5 461 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 FAM81AQ8TBF8 368 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 FANK1Q8TC84 345 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MIB2Q96AX9 1013 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ZNF524Q96C55 264 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 KLHL15Q96M94 604 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ERMAPQ96PL5 475 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 NR1H4Q96RI1 486 aaPredicted RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 MBOAT4Q96T53 435 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 GPA33Q99795 319 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 KLHDC3Q9BQ90 382 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ANKRD60Q9BZ19 345 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 PRRG4Q9BZD6 226 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 OR11A1Q9GZK7 315 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 EGLN3Q9H6Z9 239 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 SLC25A19Q9HC21 320 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 CHST11Q9NPF2 352 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 INIPQ9NRY2 104 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 CLN6Q9NWW5 311 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 ALKBH4Q9NXW9 302 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 MRPL39Q9NYK5 338 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 GRHPRQ9UBQ7 328 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 KLHL21Q9UJP4 597 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 NDRG4Q9ULP0 352 aaKnown RBP4.11□□□□□ -1.75
CDR2-203ENST00000563573 RASD1Q9Y272 281 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 SIGLEC7Q9Y286 467 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 B3GNT3Q9Y2A9 372 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms