RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 EVX1P49640 407 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 GZMKP49863 264 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 ERVS71-1P61550 626 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 MRPS34P82930 218 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 HSF2Q03933 536 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 TBC1D28Q2M2D7 210 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 PABPC1L2AQ5JQF8 200 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 RGS7BPQ6MZT1 257 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 SLC25A47Q6Q0C1 308 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 TBPL2Q6SJ96 375 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 TSEN54Q7Z6J9 526 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 OAFQ86UD1 273 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 RNF148Q8N7C7 305 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF519Q8TB69 540 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 UBASH3BQ8TF42 649 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 CMTM5Q96DZ9 223 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 ALG12Q9BV10 488 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 NSRP1Q9H0G5 558 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 C1orf198Q9H425 327 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 CHODLQ9H9P2 273 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 SPAG4Q9NPE6 437 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 REV1Q9UBZ9 1251 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 DUSP13Q9UII6 198 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF346Q9UL40 294 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 ENPP4Q9Y6X5 453 aa14.77□□□□□ -0.05
CDC42BPB-208ENST00000561271 IQCMA0A1B0GVH7 501 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 HTR3EA5X5Y0 456 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 H7C1C5 153 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 NDUFAB1O14561 156 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 CDC42EP2O14613 210 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 SNX3O60493 162 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 SNAP29O95721 258 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 NR2C1P13056 603 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF23P17027 643 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF32P17041 273 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 GIFP27352 417 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 LCN6P62502 163 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ERVK-25P63136 954 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 PLP2Q04941 152 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 TAF11Q15544 211 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 SGCAQ16586 387 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ALKBH6Q3KRA9 238 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 MBOAT2Q6ZWT7 520 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 CYP4Z1Q86W10 505 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF786Q8N393 782 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 FAM86B1Q8N7N1 296 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ICA1LQ8NDH6 482 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 MSI2Q96DH6 328 aaKnown RBP14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 SOX7Q9BT81 388 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 SIAEQ9HAT2 523 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 CCNB1IP1Q9NPC3 277 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ADA2Q9NZK5 511 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 V9GYQ6 96 aa14.76□□□□□ -0.05
CDC42BPB-208ENST00000561271 ARHGAP32A7KAX9 2087 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 A0A1W2PPL8 197 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 MGRN1O60291 552 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 NCR1O76036 304 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 CLPTM1O96005 669 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 HPXP02790 462 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 LCKP06239 509 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 NAT2P11245 290 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 IGFBP5P24593 272 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 PRDX6P30041 224 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 APLNRP35414 380 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 SLC9A3P48764 834 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 GYS2P54840 703 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 TRIP10Q15642 601 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 FGD3Q5JSP0 725 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 FAM205BPQ63HN1 556 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 RNF113BQ8IZP6 322 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 ARIH2OSQ8N7S6 290 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 FAM156AQ8NDB6 213 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF540Q8NDQ6 660 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 CPEB3Q8NE35 698 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 AKR7LQ8NHP1 331 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 SLC7A13Q8TCU3 470 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 FAM46AQ96IP4 442 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 SNX18Q96RF0 628 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 KCNN2Q9H2S1 579 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 MS4A5Q9H3V2 200 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 NMNAT1Q9HAN9 279 aaPredicted RBP14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 RPS6KA6Q9UK32 745 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 CDC42EP3Q9UKI2 254 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 ADAM18Q9Y3Q7 739 aa14.75□□□□□ -0.05
CDC42BPB-208ENST00000561271 LOC100289279A0A1B0GTE1 492 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 A6NIZ1 184 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 LMX1BO60663 402 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 DIRAS1O95057 198 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 PTHP01270 115 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 H1F0P07305 194 aaKnown RBP14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 ZNF26P17031 533 aaPredicted RBP14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 CCNOP22674 350 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 LAP3P28838 519 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 IL2RGP31785 369 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 RPL4P36578 427 aaKnown RBP14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 RAP1BP61224 184 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 RAP1AP62834 184 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 GLO1Q04760 184 aa14.74□□□□□ -0.05
CDC42BPB-208ENST00000561271 RIN1Q13671 783 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms