RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 RIN1Q13671 783 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 C1DQ13901 141 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 DGCR6Q14129 220 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TAB1Q15750 504 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 SYPL1Q16563 259 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 KLHL22Q53GT1 634 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CCDC92Q53HC0 331 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 Q5PR19 223 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 COX20Q5RI15 118 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 NCMAPQ5T1S8 102 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 C12orf73Q69YU5 71 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ZNF544Q6NX49 715 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ZNF704Q6ZNC4 412 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 DNM1P46Q6ZS02 220 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 AHSA2Q719I0 299 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TSEN54Q7Z6J9 526 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 VTCN1Q7Z7D3 282 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 BIVMQ86UB2 503 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 AKAP14Q86UN6 197 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ADGRG3Q86Y34 549 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 OR9Q1Q8NGQ5 310 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 LILRB1Q8NHL6 650 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 PIGXQ8TBF5 258 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 XAGE5Q8WWM1 108 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CNOT9Q92600 299 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 S100PBPQ96BU1 408 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 PIK3IP1Q96FE7 263 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 OR5B2Q96R09 309 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ZNF607Q96SK3 696 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 MGLLQ99685 303 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CCL19Q99731 98 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 FUZQ9BT04 418 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 HDHD5Q9BXW7 423 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 PRRG4Q9BZD6 226 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 C12orf49Q9H741 205 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CTPS2Q9NRF8 586 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 NDUFB11Q9NX14 153 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 P2RX2Q9UBL9 471 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TMCC3Q9ULS5 477 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 SPIN1Q9Y657 262 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 HIVEP2P31629 2446 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 MAP1AP78559 2803 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 SONP18583 2426 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 IGHV3-15A0A0B4J1V0 119 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 FAM172BPA6NC97 362 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 CENPBD1B2RD01 187 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ZNF670-ZNF695F2Z2N8 137 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 hCG_2039718K7EN88 272 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 AP3D1O14617 1153 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 FRS3O43559 492 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 RAMP1O60894 148 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 CPSF4O95639 269 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 PLAUP00749 431 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 HLA-DQB1P01920 261 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 LCKP06239 509 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 DBIP07108 87 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 TFPTP0C1Z6 253 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 IGHV1-2P23083 117 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 FGF9P31371 208 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 NTF4P34130 210 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 CHI3L1P36222 383 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 IFNGR2P38484 337 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ACAA2P42765 397 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 MAP2K4P45985 399 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 HTR3AP46098 478 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 KCNJ5P48544 419 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 GSSP48637 474 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PTH2RP49190 550 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 EIF2B2P49770 351 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 P2RY4P51582 365 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 NCS1P62166 190 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 NKX6-1P78426 367 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 EFNB1P98172 346 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 SPIBQ01892 262 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 KRTAP1-1Q07627 177 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 RASGEF1BQ0VAM2 473 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 RAB40BQ12829 278 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 GPR50Q13585 617 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PTGES3Q15185 160 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 SEC23BQ15437 767 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ZSWIM7Q19AV6 140 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 EXOC3L2Q2M3D2 409 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ARMCX4Q5H9R4 360 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 TIMM23BQ5SRD1 257 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 AGAP6Q5VW22 663 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 STEAP3Q658P3 488 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PAQR6Q6TCH4 344 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ZNF836Q6ZNA1 936 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 GALNT5Q7Z7M9 940 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 CCDC103Q8IW40 242 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ZNF440Q8IYI8 595 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PARP16Q8N5Y8 322 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 ZNF433Q8N7K0 673 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 GDPD1Q8N9F7 314 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 C1orf162Q8NEQ5 155 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 AP3S1Q92572 193 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 SGCDQ92629 289 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms