RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 PHF21AQ96BD5 680 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZNF707Q96C28 371 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 NXPE2Q96DL1 559 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TM4SF19Q96DZ7 209 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PELI1Q96FA3 418 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SLC35A4Q96G79 324 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C16orf58Q96GQ5 468 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RBM18Q96H35 190 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 C4orf36Q96KX1 117 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C12orf66Q96MD2 445 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PRAP1Q96NZ9 151 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LRRC3BQ96PB8 259 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RBP7Q96R05 134 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MYADMQ96S97 322 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GPX7Q96SL4 187 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 CNN2Q99439 309 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 CD180Q99467 661 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 STACQ99469 402 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SDF2Q99470 211 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TEAD3Q99594 435 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GFI1Q99684 422 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CACNG6Q9BXT2 260 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 NMNAT2Q9BZQ4 307 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ACTR6Q9GZN1 396 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 HDHD2Q9H0R4 259 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RERGLQ9H628 205 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 AUNIPQ9H7T9 357 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MTHFD2LQ9H903 347 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 MED20Q9H944 212 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CACYBPQ9HB71 228 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 TRPV4Q9HBA0 871 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MCCC2Q9HCC0 563 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LYRM4Q9HD34 91 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 EQTNQ9NQ60 294 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MEPEQ9NQ76 525 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 PRSS16Q9NQE7 514 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PHPT1Q9NRX4 125 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 TM7SF3Q9NS93 570 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C20orf141Q9NUB4 165 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ANKRD10Q9NXR5 420 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OBP2AQ9NY56 170 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MAT2BQ9NZL9 334 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FLRT3Q9NZU0 649 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MSRB1Q9NZV6 116 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZNF624Q9P2J8 865 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPS6KB2Q9UBS0 482 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CHRNA9Q9UGM1 479 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 UBQLN2Q9UHD9 624 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TEKT2Q9UIF3 430 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 KIF25Q9UIL4 384 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 POMT2Q9UKY4 750 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ABT1Q9ULW3 272 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 MGAT4AQ9UM21 535 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C19orf53Q9UNZ5 99 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 CAMK2AQ9UQM7 478 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TMA7Q9Y2S6 64 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 PRKAB1Q9Y478 270 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 WDR45Q9Y484 360 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 HEBP2Q9Y5Z4 205 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ETV7Q9Y603 341 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 KIF26BQ2KJY2 2108 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 FER1L5A0AVI2 2057 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ATG2BQ96BY7 2078 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MYO7AQ13402 2215 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 GOLGA4Q13439 2230 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRAV6A0A075B6T7 132 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRAV27A0A087WT01 109 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 LOC105369274A0A096LPK9 316 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRBV5-7A0A0A0MS05 114 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A0A0B4J203 849 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRBV5-5A0A0J9YX44 114 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GVY2 172 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GWA3 101 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PRG6 482 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ANKRD20A5PA0PJZ0 165 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 GXYLT2A0PJZ3 443 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A6NCN8 305 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRABD2BA6NFA1 517 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MFSD2BA6NFX1 497 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 IGLON5A6NGN9 336 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 IFITM5A6NNB3 132 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 HIDE1A8MVS5 230 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SNRPGP15A8MWD9 76 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 A8MXK9 166 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF879B4DU55 563 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MCIDASD6RGH6 385 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 C5orf67F2Z3F1 127 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRIM77I1YAP6 450 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 I3L521 148 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 M0R233 179 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PEX12O00623 359 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PDCD5O14737 125 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ARPC3O15145 178 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MID1O15344 667 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PIN1P1O15428 100 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 P2RX6O15547 441 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TPD52L2O43399 206 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 TNFSF14O43557 240 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PLRG1O43660 514 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 FCMRO60667 390 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms