RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 VSTM2LQ96N03 204 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 ERMAPQ96PL5 475 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 SLC38A2Q96QD8 506 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 LMF2Q9BU23 707 aaKnown RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 MS4A7Q9GZW8 240 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 METTL9Q9H1A3 318 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 WDR54Q9H977 334 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 AKIRIN1Q9H9L7 192 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 CACYBPQ9HB71 228 aaKnown RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 ZBTB20Q9HC78 741 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 PLCXD1Q9NUJ7 323 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 VSX1Q9NZR4 365 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-216ENST00000559496 C11orf21Q9P2W6 132 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 COPS7AQ9UBW8 275 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 SEC14L3Q9UDX4 400 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 WDR45Q9Y484 360 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 KNTC1P50748 2209 aa6.34□□□□□ -1.39
ZEB1-216ENST00000559496 IGHV3-20A0A0C4DH32 117 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 A0A1W2PNU3 283 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GXYLT2A0PJZ3 443 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 G3V2T6 193 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 WWP2O00308 870 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GNGT2O14610 69 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MITFO75030 526 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MPC2O95563 127 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 CST1P01037 141 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 CLPSP04118 112 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SEMG1P04279 462 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 FABP3P05413 133 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SBK2P0C263 348 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ANXA8P13928 327 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 TNFRSF1BP20333 461 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 RAB3BP20337 219 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GADD45AP24522 165 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MAP3K8P41279 467 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MAGEA2P43356 314 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SLC37A1P57057 533 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 CD81P60033 236 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 PSG6Q00889 435 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ALKBH1Q13686 389 aaKnown RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SMCO1Q147U7 214 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 NNATQ16517 81 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GLYR1Q49A26 553 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 FLYWCH1Q4VC44 716 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 DCST2Q5T1A1 773 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 B3GNTL1Q67FW5 361 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 FAM199XQ6PEV8 388 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 METAP1DQ6UB28 335 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 C16orf54Q6UWD8 224 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 PAMR1Q6UXH9 720 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 FRRS1Q6ZNA5 592 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 HMGN2P46Q86SG4 172 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GLB1L2Q8IW92 636 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF321PQ8N8H1 164 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF615Q8N8J6 731 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF527Q8NB42 609 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MORN4Q8NDC4 146 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 OR6X1Q8NH79 312 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF721Q8TF20 911 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 TMBIM1Q969X1 311 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 NARS2Q96I59 477 aaKnown RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SLC46A1Q96NT5 459 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SDF2Q99470 211 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 NUDT9Q9BW91 350 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 AMBRA1Q9C0C7 1298 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF350Q9GZX5 532 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 MED28Q9H204 178 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 SLC38A1Q9H2H9 487 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 TCF7L1Q9HCS4 588 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 Q9N2J8 555 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 C19orf25Q9UFG5 118 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 PADI1Q9ULC6 663 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 GAB2Q9UQC2 676 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 TP53TG5Q9Y2B4 290 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 PADI2Q9Y2J8 665 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 PTRH2Q9Y3E5 179 aaKnown RBP6.33□□□□□ -1.4
ZEB1-216ENST00000559496 OR10H1Q9Y4A9 318 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 VPS13AQ96RL7 3174 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 DSPPQ9NZW4 1301 aa6.33□□□□□ -1.4
ZEB1-216ENST00000559496 IQCMA0A1B0GVH7 501 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FAM74A7A6NL05 159 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 TMEM210A6NLX4 147 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR6C76A6NM76 312 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 MARCH11A6NNE9 402 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 L7N2F9 121 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 M0R233 179 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 BCKDKO14874 412 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 TCAPO15273 167 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PLA2G10O15496 165 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 KIAA0513O60268 411 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FCMRO60667 390 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 HPGDSO60760 199 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 GPX5O75715 221 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 TNFSF15O95150 251 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 LGI1O95970 557 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms