RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 MESTQ5EB52 335 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 GKAP1Q5VSY0 366 aaPredicted RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 TMEM53Q6P2H8 277 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 RRM2BQ7LG56 351 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FAM122BQ7Z309 247 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 SLC30A7Q8NEW0 376 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FNDC8Q8TC99 324 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 C10orf105Q8TEF2 133 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FAM168AQ92567 244 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 MRPL24Q96A35 216 aaKnown RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 PYURFQ96I23 114 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 RHNO1Q9BSD3 238 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FUZQ9BT04 418 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 MRPL37Q9BZE1 423 aaKnown RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 C1orf198Q9H425 327 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 SLC7A8Q9UHI5 535 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FBXO9Q9UK97 447 aaPredicted RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 SIGLEC7Q9Y286 467 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 FAM32AQ9Y421 112 aaKnown RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 CUBNO60494 3623 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 ABCA1O95477 2261 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 TMEM129A0AVI4 362 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 H7C1C5 153 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 MGRN1O60291 552 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 SNAP29O95721 258 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 FABP3P05413 133 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 CD14P08571 375 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 IGFBP1P08833 259 aaPredicted RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 SLC25A16P16260 332 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 ITGA2P17301 1181 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 ATP6V1B2P21281 511 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 GLRXP35754 106 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 RPL4P36578 427 aaKnown RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 MNAT1P51948 309 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 FXYD6P3P58550 94 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 LCN6P62502 163 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 ERVK-25P63136 954 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 SPIBQ01892 262 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 THEM4Q5T1C6 240 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 FOXL2NBQ6ZUU3 175 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 LRRC18Q8N456 261 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 PAQR4Q8N4S7 273 aaPredicted RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 ARIH2OSQ8N7S6 290 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 CCDC197Q8NCU1 140 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 NSMAFQ92636 917 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 RSRC1Q96IZ7 334 aaKnown RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 Q96M85 177 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 ZNF570Q96NI8 536 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 DOK1Q99704 481 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 VRK1Q99986 396 aaPredicted RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 NDEL1Q9GZM8 345 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 RNF121Q9H920 327 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 SIAEQ9HAT2 523 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 KRCC1Q9NPI7 259 aaPredicted RBP9.43□□□□□ -0.9
SPG11-216ENST00000559347 CMAHPQ9Y471 501 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 SPEF1Q9Y4P9 236 aa9.43□□□□□ -0.9
SPG11-216ENST00000559347 RTTNQ86VV8 2226 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 TEX13CA0A0J9YWL9 993 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 A0A1W2PPL8 197 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 SH3PXD2BA1X283 911 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 VSTM5A8MXK1 200 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 NDUFB2O95178 105 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 GADD45GO95257 159 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 CCL2P13500 99 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 ZNF32P17041 273 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 PDLIM4P50479 330 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 KRR1Q13601 381 aaKnown RBP9.42□□□□□ -0.9
SPG11-216ENST00000559347 TBC1D28Q2M2D7 210 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 PABPC1L2AQ5JQF8 200 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 OR52J3Q8NH60 311 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
SPG11-216ENST00000559347 MCUR1Q96AQ8 359 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 RASD2Q96D21 266 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 RBP7Q96R05 134 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 GPA33Q99795 319 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 CDH20Q9HBT6 801 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 DYNLRB1Q9NP97 96 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 MYOZ1Q9NP98 299 aaPredicted RBP9.42□□□□□ -0.9
SPG11-216ENST00000559347 NRIP3Q9NQ35 241 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 FAM53CQ9NYF3 392 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 ACTR3BQ9P1U1 418 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 MYEF2Q9P2K5 600 aaKnown RBP9.42□□□□□ -0.9
SPG11-216ENST00000559347 GRHPRQ9UBQ7 328 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 IL20RAQ9UHF4 553 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 AURKCQ9UQB9 309 aa9.42□□□□□ -0.9
SPG11-216ENST00000559347 SONP18583 2426 aaKnown RBP9.42□□□□□ -0.9
SPG11-216ENST00000559347 IQCMA0A1B0GVH7 501 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 SLC22A23A1A5C7 686 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 UNC119BA6NIH7 251 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 B2RBV5 119 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 M0R233 179 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 NDUFS8O00217 210 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms