RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TMEM38BQ9NVV0 291 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 UPB1Q9UBR1 384 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 GPR52Q9Y2T5 361 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 KLF2Q9Y5W3 355 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 HSPE1-MOB4S4R3N1 261 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 EEF1E1-BLOC1S5C9J1V9 151 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 EEF1E1O43324 174 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 RENP00797 406 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 HRGP04196 525 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 SCG5P05408 212 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 UGT2B10P36537 528 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 CDC42P60953 191 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 ARF1P84077 181 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 TEKQ02763 1124 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 CD47Q08722 323 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 DBPQ10586 325 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 SNCBQ16143 134 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 OCLNQ16625 522 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 FAM27BQ5VT28 67 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 IZUMO2Q6UXV1 221 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 TCEANCQ8N8B7 351 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC26A10Q8NG04 563 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 KISS1RQ969F8 398 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF75AQ96N20 296 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 FOXB1Q99853 325 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 USB1Q9BQ65 265 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 TEX12Q9BXU0 123 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 RPRD1BQ9NQG5 326 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 B3GNT2Q9NY97 397 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
SNRPA1-207ENST00000559309 ARPC4-TTLL3A0A0A6YYG9 625 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 CCDC182A6NF36 153 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 M0R129 80 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC16A7O60669 478 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 WBP4O75554 376 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 TFP02787 698 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 GNAO1P09471 354 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 CLUP10909 449 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 GRNP28799 593 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 CENPAP49450 140 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC35D3Q5M8T2 416 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 OR7E24Q6IFN5 339 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 ANKRD16Q6P6B7 361 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 DNM1P34Q6PK57 102 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 CXXC5Q7LFL8 322 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 DEPDC4Q8N2C3 294 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 UBE2J2Q8N2K1 259 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 WDR31Q8NA23 367 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 BBS1Q8NFJ9 593 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 OR2T4Q8NH00 348 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 FAM81AQ8TBF8 368 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 MED20Q9H944 212 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 SIAEQ9HAT2 523 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 POLE4Q9NR33 117 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 MRPL22Q9NWU5 206 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 HAO2Q9NYQ3 351 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 MOKQ9UQ07 419 aa12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 COA3Q9Y2R0 106 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 OR5H1A6NKK0 313 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 PRR23D1E9PI22 279 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 TLX2O43763 284 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 MPZL2O60487 215 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 LYZL6O75951 148 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 GLCEO94923 617 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 AGFG2O95081 481 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 CLIC3O95833 236 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 MMP7P09237 267 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 PRR23D2P0DMB1 279 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 NPR2P20594 1047 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 LAP3P28838 519 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 HSPA13P48723 471 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 HIST1H3AP68431 136 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 ENDOGQ14249 297 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 GGTLC2Q14390 218 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 TEX30Q5JUR7 227 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 HIST2H3PS2Q5TEC6 136 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 HIST2H3AQ71DI3 136 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 P2RY8Q86VZ1 359 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 GLB1L2Q8IW92 636 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC22A24Q8N4F4 322 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF555Q8NEP9 628 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 OR9Q1Q8NGQ5 310 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 WACQ9BTA9 647 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 SRA1Q9HD15 236 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 RAB26Q9ULW5 256 aa12.96□□□□□ -0.33
SNRPA1-207ENST00000559309 C16orf97H3BN30 126 aa12.95□□□□□ -0.34
SNRPA1-207ENST00000559309 C19orf84I3L1E1 186 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms