RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 HRH1P35367 487 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 LHX2P50458 406 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 RAB9AP51151 201 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 KRTAP10-3P60369 221 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 CLINT1Q14677 625 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 SPECC1LQ69YQ0 1117 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 TMEM179Q6ZVK1 233 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 MREGQ8N565 214 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 PRELID2Q8N945 189 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 ACTRT1Q8TDG2 376 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 NYAP2Q9P242 653 aa7.34□□□□□ -1.23
CASC4-208ENST00000559151 SCN2AQ99250 2005 aa7.34□□□□□ -1.24
CASC4-208ENST00000559151 PHLPP2Q6ZVD8 1323 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 TRAV39A0A0B4J263 110 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 NDUFAB1O14561 156 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 PNMA6AP0CW24 399 aaPredicted RBP7.33□□□□□ -1.24
CASC4-208ENST00000559151 MYL2P10916 166 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 STOMP27105 288 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 NMUP48645 174 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 CX3CR1P49238 355 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 TWF1Q12792 350 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 OR51G1Q8NGK1 321 aa7.33□□□□□ -1.24
CASC4-208ENST00000559151 DMAP1Q9NPF5 467 aaPredicted RBP7.33□□□□□ -1.24
CASC4-208ENST00000559151 NFASCO94856 1347 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 PINLYPA6NC86 204 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 KMOO15229 486 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 HUS1O60921 280 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 IGLV2-23P01705 113 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 BGLAPP02818 100 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 BCKDHBP21953 392 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 CRISP1P54107 249 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 PON3Q15166 354 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 MPPED2Q15777 294 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 TMEM183BQ1AE95 376 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 TTLL9Q3SXZ7 439 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 SSX9Q7RTT3 188 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 ASB9Q96DX5 294 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 SERPINB12Q96P63 405 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 MRPL37Q9BZE1 423 aaKnown RBP7.32□□□□□ -1.24
CASC4-208ENST00000559151 TMEM165Q9HC07 324 aa7.32□□□□□ -1.24
CASC4-208ENST00000559151 ZNF331Q9NQX6 463 aaPredicted RBP7.32□□□□□ -1.24
CASC4-208ENST00000559151 C20orf96Q9NUD7 363 aaPredicted RBP7.32□□□□□ -1.24
CASC4-208ENST00000559151 MRPS18BQ9Y676 258 aaKnown RBP7.32□□□□□ -1.24
CASC4-208ENST00000559151 NCF1BA6NI72 391 aaPredicted RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 FAM166BA8MTA8 275 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 NCF1CA8MVU1 366 aaPredicted RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 LAD1O00515 517 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 EIF4E2O60573 245 aaKnown RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 SMIM10L1P0DMW3 83 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 NR2C1P13056 603 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 DRD3P35462 400 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 ZNF133P52736 654 aaPredicted RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 PAX5Q02548 391 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 TWF2Q6IBS0 349 aaKnown RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 H2AFVQ71UI9 128 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 AKNAQ7Z591 1439 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 Q8N7P7 452 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 SMIM10Q96HG1 83 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 TSSK3Q96PN8 268 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 CDC42EP4Q9H3Q1 356 aaKnown RBP7.31□□□□□ -1.24
CASC4-208ENST00000559151 TBC1D24Q9ULP9 559 aa7.31□□□□□ -1.24
CASC4-208ENST00000559151 PCCAP05165 728 aaPredicted RBP7.3□□□□□ -1.24
CASC4-208ENST00000559151 RSPO1Q2MKA7 263 aaPredicted RBP7.3□□□□□ -1.24
CASC4-208ENST00000559151 HSDL1Q3SXM5 330 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 C6orf120Q7Z4R8 191 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 KATNAL2Q8IYT4 538 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 PQLC3Q8N755 202 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 ZNF433Q8N7K0 673 aaPredicted RBP7.3□□□□□ -1.24
CASC4-208ENST00000559151 IL22RA2Q969J5 263 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 FAM3DQ96BQ1 224 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 C8orf44Q96CB5 159 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 GSDMAQ96QA5 445 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 TEKT3Q9BXF9 490 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 PDP1Q9P0J1 537 aaPredicted RBP7.3□□□□□ -1.24
CASC4-208ENST00000559151 LGALS13Q9UHV8 139 aa7.3□□□□□ -1.24
CASC4-208ENST00000559151 MAP3K15Q6ZN16 1313 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 H0YIV9 168 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 CXCL5P42830 114 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 RPS5P46782 204 aaKnown RBP7.29□□□□□ -1.24
CASC4-208ENST00000559151 CSNK1EP49674 416 aaKnown RBP7.29□□□□□ -1.24
CASC4-208ENST00000559151 CCR6P51684 374 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 SLC7A9P82251 487 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 LYPD2Q6UXB3 125 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 MKXQ8IYA7 352 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 RETNQ9HD89 108 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 CCNB1IP1Q9NPC3 277 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 STOX2Q9P2F5 926 aaPredicted RBP7.29□□□□□ -1.24
CASC4-208ENST00000559151 ST3GAL6Q9Y274 331 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 SLC17A4Q9Y2C5 497 aa7.29□□□□□ -1.24
CASC4-208ENST00000559151 CENPJQ9HC77 1338 aaPredicted RBP7.28□□□□□ -1.24
CASC4-208ENST00000559151 IGHV3-64DA0A0J9YX35 117 aa7.28□□□□□ -1.24
CASC4-208ENST00000559151 NKX2-6A6NCS4 301 aa7.28□□□□□ -1.24
CASC4-208ENST00000559151 CD5LO43866 347 aa7.28□□□□□ -1.24
CASC4-208ENST00000559151 SRP72O76094 671 aaKnown RBP7.28□□□□□ -1.24
CASC4-208ENST00000559151 MRPL19P49406 292 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms