RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CDH20Q9HBT6 801 aa6.94□□□□□ -1.3
TRAF3-205ENST00000558700 AP5S1Q9NUS5 200 aa6.94□□□□□ -1.3
TRAF3-205ENST00000558700 TMEM38BQ9NVV0 291 aa6.94□□□□□ -1.3
TRAF3-205ENST00000558700 GLTPQ9NZD2 209 aa6.94□□□□□ -1.3
TRAF3-205ENST00000558700 SLC7A8Q9UHI5 535 aa6.94□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF346Q9UL40 294 aaKnown RBP6.94□□□□□ -1.3
TRAF3-205ENST00000558700 A0A1W2PPW3 197 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 A0A1W2PRG6 482 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 TMEM129A0AVI4 362 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SLC22A23A1A5C7 686 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 GMNCA6NCL1 334 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 CENPBD1B2RD01 187 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 FBP2O00757 339 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 MRASO14807 208 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 DHHO43323 396 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 OR5F1O95221 314 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 TGFAP01135 160 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 NPPAP01160 153 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 PTHP01270 115 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 IGF2P01344 180 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 IFNA14P01570 189 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 THY1P04216 161 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SERPINA5P05154 406 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 ADRA2AP08913 450 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 ASAH2BP0C7U1 165 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 PGA4P0DJD7 388 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 PGA3P0DJD8 388 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 APEX1P27695 318 aaKnown RBP6.93□□□□□ -1.3
TRAF3-205ENST00000558700 TAS2R41P59536 307 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SELENOVP59797 346 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 RAB39AQ14964 217 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 TBC1D28Q2M2D7 210 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SLC36A2Q495M3 483 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 MMEL1Q495T6 779 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 NRN1LQ496H8 165 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 RABL3Q5HYI8 236 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 RGS7BPQ6MZT1 257 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-205ENST00000558700 NANOGP8Q6NSW7 305 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 NHLRC1Q6VVB1 395 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 CARM1Q86X55 608 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 RBM45Q8IUH3 476 aaKnown RBP6.93□□□□□ -1.3
TRAF3-205ENST00000558700 WDFY1Q8IWB7 410 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SLC22A24Q8N4F4 322 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 ARIH2OSQ8N7S6 290 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SLC30A7Q8NEW0 376 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 OR4D11Q8NGI4 311 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SNX33Q8WV41 574 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF75AQ96N20 296 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 SNX18Q96RF0 628 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 ECSITQ9BQ95 431 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 TMEM120AQ9BXJ8 343 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 RNF121Q9H920 327 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 NANOGQ9H9S0 305 aa6.93□□□□□ -1.3
TRAF3-205ENST00000558700 H2AFY2Q9P0M6 372 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-205ENST00000558700 IQCMA0A1B0GVH7 501 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 LRP5LA4QPB2 252 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 NPIPB13A6NJU9 1138 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 FAM220BPB1ANY3 271 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 NPIPB4C9JG80 1138 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 BLOC1S5-TXNDC5H3BN57 136 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 FXYD1O00168 92 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 MGRN1O60291 552 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 OR7A10O76100 309 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 SNAP29O95721 258 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 TFP02787 698 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 MT-ND1P03886 318 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 IGFBP1P08833 259 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 THRBP10828 461 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 H2AFXP16104 143 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 ACHEP22303 614 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 IFNA8P32881 189 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 ALDH3B1P43353 468 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 GPR6P46095 362 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 GZMMP51124 257 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 CRYBA2P53672 197 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 UGT2B15P54855 530 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 CDH15P55291 814 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 SCAND1P57086 179 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 KLF3P57682 345 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 PLP2Q04941 152 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 RPL18Q07020 188 aaKnown RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 RIN1Q13671 783 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 LRRC23Q53EV4 343 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 IL17RELQ6ZVW7 336 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 SLC16A14Q7RTX9 510 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 ARPINQ7Z6K5 226 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 CALHM3Q86XJ0 350 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 SKA3Q8IX90 412 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 ZCCHC24Q8N2G6 241 aaKnown RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 LINC01356Q8N9X3 169 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 PCYOX1LQ8NBM8 494 aa6.92□□□□□ -1.3
TRAF3-205ENST00000558700 RBM15BQ8NDT2 890 aaKnown RBP6.92□□□□□ -1.3
TRAF3-205ENST00000558700 OR4K5Q8NGD3 323 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms