RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ABHD13Q7L211 337 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 ZNF227Q86WZ6 799 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 PAQR8Q8TEZ7 354 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 FAM3DQ96BQ1 224 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 FBXO17Q96EF6 278 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
LDLR-205ENST00000557933 GAL3ST4Q96RP7 486 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 LPAR4Q99677 370 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 TIMM29Q9BSF4 260 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 GDE1Q9NZC3 331 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 PLCL2Q9UPR0 1127 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 ASPMQ8IZT6 3477 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 TMEM82A0PJX8 343 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 TMEM200CA6NKL6 621 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 DISC1C4P0D8 188 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 F5H0A9 414 aaPredicted RBP11.16□□□□□ -0.62
LDLR-205ENST00000557933 PRAMEF2O60811 474 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 RAB3DO95716 219 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 HPP00738 406 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 CBR1P16152 277 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 AKR1C4P17516 323 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 MPGP29372 298 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 GRK6P43250 576 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 KIR3DL2P43630 455 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 RPL18Q07020 188 aaKnown RBP11.16□□□□□ -0.62
LDLR-205ENST00000557933 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 C16orf52Q8NHV5 167 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 TSNAXQ99598 290 aaKnown RBP11.16□□□□□ -0.62
LDLR-205ENST00000557933 TAS2R4Q9NYW5 299 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 GRHPRQ9UBQ7 328 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 FANCMQ8IYD8 2048 aa11.16□□□□□ -0.62
LDLR-205ENST00000557933 CPED1A4D0V7 1026 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 NAP1L6A6NFF2 107 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 OR4C45A6NMZ5 311 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 KCNJ13O60928 360 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 C4BPBP20851 252 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 GMFBP60983 142 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 ZNHIT3Q15649 155 aaPredicted RBP11.15□□□□□ -0.62
LDLR-205ENST00000557933 GABRG1Q8N1C3 465 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 C12orf45Q8N5I9 185 aaPredicted RBP11.15□□□□□ -0.62
LDLR-205ENST00000557933 CHST4Q8NCG5 386 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 ZNF563Q8TA94 476 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 FLVCR1-AS1Q8TAF5 88 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 NUDCD2Q8WVJ2 157 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 SLC6A7Q99884 636 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 ZNF426Q9BUY5 554 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
LDLR-205ENST00000557933 OR2S2Q9NQN1 319 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 FAM96BQ9Y3D0 163 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 FAM186AA6NE01 2351 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 XRCC3O43542 346 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 BDKRB2P30411 391 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 GDI1P31150 447 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 RPS21P63220 83 aaKnown RBP11.15□□□□□ -0.62
LDLR-205ENST00000557933 DHRS2Q13268 280 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 RUNX3Q13761 415 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 PRAMEF17Q5VTA0 474 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 CORO6Q6QEF8 472 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 BAIAP2L2Q6UXY1 529 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 LINC00346Q8IVM7 164 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 RAB7BQ96AH8 199 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 KLF15Q9UIH9 416 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 TMED7Q9Y3B3 224 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 MUC22E2RYF6 1773 aaPredicted RBP11.15□□□□□ -0.62
LDLR-205ENST00000557933 NBEAQ8NFP9 2946 aa11.15□□□□□ -0.62
LDLR-205ENST00000557933 EPOPA6NHQ4 379 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 H0YIG0 161 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 OR2T1O43869 369 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 GPRIN2O60269 458 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 RAB40ALP0C0E4 278 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 AKAIN1P0CW23 69 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 NFYBP25208 207 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 DLSTP36957 453 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 PDSS1Q5T2R2 415 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 CDCP2Q5VXM1 449 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 RAB12Q6IQ22 244 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 ZCCHC12Q6PEW1 402 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 OR2W3Q7Z3T1 314 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.63
LDLR-205ENST00000557933 CAMKVQ8NCB2 501 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 SLC2A12Q8TD20 617 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 RAB40AQ8WXH6 277 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.63
LDLR-205ENST00000557933 SPACA6W5XKT8 324 aa11.15□□□□□ -0.63
LDLR-205ENST00000557933 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 UNC13CQ8NB66 2214 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 A0A087WUJ7 227 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 OPN1LWP04000 364 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 GLAP06280 429 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 COL9A1P20849 921 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms