RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 TEX47Q8TBZ9 253 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 FNDC8Q8TC99 324 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
USP3-205ENST00000557884 NEUROG1Q92886 237 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 CENPNQ96H22 339 aaPredicted RBP12.5□□□□□ -0.41
USP3-205ENST00000557884 TSSK2Q96PF2 358 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 SLC38A2Q96QD8 506 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 LIME1Q9H400 295 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 FN3KQ9H479 309 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 ZNF224Q9NZL3 707 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 REV1Q9UBZ9 1251 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 IGHV1-18A0A0C4DH31 117 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 IDH3BO43837 385 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 AHCYL1O43865 530 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
USP3-205ENST00000557884 RENP00797 406 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 CBR1P16152 277 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 PTAFRP25105 342 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 GIPRP48546 466 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 PTDSS1P48651 473 aaKnown RBP12.49□□□□□ -0.41
USP3-205ENST00000557884 CENPAP49450 140 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP3-205ENST00000557884 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.49□□□□□ -0.41
USP3-205ENST00000557884 MYPOPQ86VE0 399 aaPredicted RBP12.49□□□□□ -0.41
USP3-205ENST00000557884 ZDHHC13Q8IUH4 622 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 CCDC36Q8IYA8 594 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 CYB561A3Q8NBI2 242 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 TMEM204Q9BSN7 226 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 NUAK2Q9H093 628 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 PLEKHF2Q9H8W4 249 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 S100A14Q9HCY8 104 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
USP3-205ENST00000557884 B3GNT2Q9NY97 397 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 OAZ3Q9UMX2 235 aa12.49□□□□□ -0.41
USP3-205ENST00000557884 ABCA4P78363 2273 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 OR6C68A6NDL8 312 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 DCTN6O00399 190 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 UBL3O95164 117 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 RAB36O95755 333 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 GPANK1O95872 356 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 SCG5P05408 212 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 CECR9P0C854 216 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 OSMP13725 252 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 LAP3P28838 519 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 CDH11P55287 796 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 RAB1AP62820 205 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 GINS1Q14691 196 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 GSG1Q2KHT4 349 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 PGGHGQ32M88 737 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 LNX2Q8N448 690 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 AKAP1Q92667 903 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP3-205ENST00000557884 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 RADILQ96JH8 1075 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 RNF121Q9H920 327 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 SIAEQ9HAT2 523 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 SRA1Q9HD15 236 aaKnown RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 RPRD1BQ9NQG5 326 aaKnown RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
USP3-205ENST00000557884 MAST4O15021 2626 aa12.48□□□□□ -0.41
USP3-205ENST00000557884 PDZD2O15018 2839 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 SHISA9B4DS77 424 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 MPZL1O95297 269 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 IGKV3-15P01624 115 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 IGLV1-44P01699 117 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 NPR2P20594 1047 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 ARR3P36575 388 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 RAB39AQ14964 217 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 ACSM5Q6NUN0 579 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 DNM1P34Q6PK57 102 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 UGT2A3Q6UWM9 527 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 FOXL2NBQ6ZUU3 175 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 CDH24Q86UP0 819 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 SLC37A3Q8NCC5 494 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 GABARAPL1Q9H0R8 117 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 POLE4Q9NR33 117 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 KRT84Q9NSB2 600 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 B9D1Q9UPM9 204 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms