RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF503-AS2A6NEH8 195 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 GGT2P36268 569 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 CENPAP49450 140 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 TUBA1BP68363 451 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 TUBA4AP68366 448 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 ALKBH2Q6NS38 261 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 ANKRD16Q6P6B7 361 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 LYPD4Q6UWN0 246 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 TUBA1AQ71U36 451 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 ZBTB46Q86UZ6 589 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 OR52N5Q8NH56 324 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 CYGBQ8WWM9 190 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 NABP1Q96AH0 204 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 ZC3HAV1LQ96H79 300 aaKnown RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SH3GL3Q99963 347 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 VCXQ9H320 206 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 AASSQ9UDR5 926 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 PRR23D1E9PI22 279 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 KHDRBS3O75525 346 aaKnown RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 PRR23D2P0DMB1 279 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SPI1P17947 270 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 CRABP1P29762 137 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SH3BGRP55822 239 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SGCAQ16586 387 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 LRRC18Q8N456 261 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SLC22A24Q8N4F4 322 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 WDR31Q8NA23 367 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 C1orf162Q8NEQ5 155 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-213ENST00000557644 PROKR2Q8NFJ6 384 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 STEAP2Q8NFT2 490 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 PITX2Q99697 317 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 OR51V1Q9H2C8 321 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 FKBP7Q9Y680 259 aa13.38□□□□□ -0.27
NEDD1-213ENST00000557644 SH3D21A4FU49 640 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 OR5H1A6NKK0 313 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 SLC16A6O15403 523 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 IGFBP2P18065 325 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 SLC25A1P53007 311 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 SORDQ00796 357 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 TAB1Q15750 504 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 MEP1BQ16820 701 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 B3GLCTQ6Y288 498 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF627Q7L945 461 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.37□□□□□ -0.27
NEDD1-213ENST00000557644 OR2T4Q8NH00 348 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 PRRG3Q9BZD7 231 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 CRYBG3Q68DQ2 2970 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 TUBAL3A6NHL2 446 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 PAICSP22234 425 aaKnown RBP13.37□□□□□ -0.27
NEDD1-213ENST00000557644 LAP3P28838 519 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 CDC42P60953 191 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 MRPS34P82930 218 aaKnown RBP13.37□□□□□ -0.27
NEDD1-213ENST00000557644 DNM1P34Q6PK57 102 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
NEDD1-213ENST00000557644 GLB1L2Q8IW92 636 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 DHRSXQ8N5I4 330 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF555Q8NEP9 628 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 MED18Q9BUE0 208 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 EMC7Q9NPA0 242 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 SLC17A5Q9NRA2 495 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 IMPAD1Q9NX62 359 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF226Q9NYT6 803 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
NEDD1-213ENST00000557644 HLA-HP01893 362 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 THBDP07204 575 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 COL8A1P27658 744 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 ADARB1P78563 741 aaKnown RBP13.36□□□□□ -0.27
NEDD1-213ENST00000557644 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 FOXL2NBQ6ZUU3 175 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 OR6K6Q8NGW6 343 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 C1QTNF6Q9BXI9 259 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 RASSF1Q9NS23 344 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 TVP23AA6NH52 213 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 TFP02787 698 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 GNAO1P09471 354 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 OR8G3PP0DMU2 310 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 GAAP10253 952 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 CAPZA2P47755 286 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 GLO1Q04760 184 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 PIGFQ07326 219 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 C11orf40Q8WZ69 217 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms