RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 C11orf40Q8WZ69 217 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 NDEL1Q9GZM8 345 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 CDH20Q9HBT6 801 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 MAN2C1Q9NTJ4 1040 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 SLCO1C1Q9NYB5 712 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 RPS6KA6Q9UK32 745 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 KCNS2Q9ULS6 477 aa10.84□□□□□ -0.67
SNX6-207ENST00000556303 IGLV3-9A0A075B6K5 115 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 IGHV4-61A0A0C4DH41 118 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 A0A1W2PRQ8 180 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SH3PXD2BA1X283 911 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 FFAR1O14842 300 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 PRSS23O95084 383 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 ZNF682O95780 498 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SERPINA1P01009 418 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 APLNRP35414 380 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 GSK3BP49841 420 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 UCP2P55851 309 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 TMEM33P57088 247 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 CTXN1P60606 82 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 PCBD1P61457 104 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 CD47Q08722 323 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 DGCR6Q14129 220 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 MSMPQ1L6U9 139 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SLC25A47Q6Q0C1 308 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 MBOAT2Q6ZWT7 520 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SYT9Q86SS6 491 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 NRMQ8IXM6 262 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 ALDH16A1Q8IZ83 802 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 ZCCHC24Q8N2G6 241 aaKnown RBP10.83□□□□□ -0.68
SNX6-207ENST00000556303 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 HDAC2Q92769 488 aaKnown RBP10.83□□□□□ -0.68
SNX6-207ENST00000556303 NABP1Q96AH0 204 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 C1orf159Q96HA4 380 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 KCTD14Q9BQ13 255 aaPredicted RBP10.83□□□□□ -0.68
SNX6-207ENST00000556303 BEX2Q9BXY8 128 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SHARPINQ9H0F6 387 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 CHODLQ9H9P2 273 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 CCNB1IP1Q9NPC3 277 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 SPAG4Q9NPE6 437 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 TMEM5Q9Y2B1 443 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
SNX6-207ENST00000556303 A0A087WUU8 490 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 LOC100289279A0A1B0GTE1 492 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 LILRA1O75019 489 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 GMNNO75496 209 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 CST2P09228 141 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 MAKP20794 623 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 ACHEP22303 614 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 NUDT2P50583 147 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 PSME3P61289 254 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 MYBPC1Q00872 1141 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 HSF2Q03933 536 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 PCGF3Q3KNV8 242 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 FAM209AQ5JX71 171 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 ZNF730Q6ZMV8 503 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 FOXL2NBQ6ZUU3 175 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 LRRC18Q8N456 261 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 SYNPRQ8TBG9 265 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 RDH5Q92781 318 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 FAM162AQ96A26 154 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 MSI2Q96DH6 328 aaKnown RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 ELAC2Q9BQ52 826 aaKnown RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 NSRP1Q9H0G5 558 aaKnown RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 NMNAT1Q9HAN9 279 aaPredicted RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 DUSP13Q9UII6 198 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 SAMD4AQ9UPU9 718 aaKnown RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 FAM32AQ9Y421 112 aaKnown RBP10.82□□□□□ -0.68
SNX6-207ENST00000556303 SNX13Q9Y5W8 968 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 ENPP4Q9Y6X5 453 aa10.82□□□□□ -0.68
SNX6-207ENST00000556303 A0A1W2PPW3 197 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 H3BSA7 217 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 J3KTA2 159 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 PIP5K1CO60331 668 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 SNX3O60493 162 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 ICMTO60725 284 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 SLC2A10O95528 541 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 MT-ND5P03915 603 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 RHCEP18577 417 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 HNF1AP20823 631 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 TUBG1P23258 451 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 STOMP27105 288 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 YAP1P46937 504 aaKnown RBP10.81□□□□□ -0.68
SNX6-207ENST00000556303 KLF3P57682 345 aaPredicted RBP10.81□□□□□ -0.68
SNX6-207ENST00000556303 FHL1Q13642 323 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 ZBED5Q49AG3 693 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 PABPC1L2AQ5JQF8 200 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 ELFN2Q5R3F8 820 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 GLYATQ6IB77 296 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 CXXC5Q7LFL8 322 aaKnown RBP10.81□□□□□ -0.68
SNX6-207ENST00000556303 LRP11Q86VZ4 500 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 ARIH2OSQ8N7S6 290 aa10.81□□□□□ -0.68
SNX6-207ENST00000556303 CPEB3Q8NE35 698 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms