RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 A0A096LPE4 126 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 A0A1W2PPZ6 126 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 A1L4Q6 167 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 OR6C68A6NDL8 312 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SNTNA6NMZ2 147 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 C12orf71A8MTZ7 269 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 H0YJX3 145 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 MPZL2O60487 215 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 TMCC2O75069 709 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 UBL3O95164 117 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SLC2A10O95528 541 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SNAP29O95721 258 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 HLA-DQA2P01906 255 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 RNF224P0DH78 156 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 COX6B1P14854 86 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CTLA4P16410 223 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 ZNF823P16415 610 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 MSR1P21757 451 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 LAP3P28838 519 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 FMO3P31513 532 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 GGT2P36268 569 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CAPZA2P47755 286 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 FOXG1P55316 489 aaPredicted RBP6.7□□□□□ -1.34
TDP1-214ENST00000556063 PCBD1P61457 104 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 FMODQ06828 376 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 PPA1Q15181 289 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SGCAQ16586 387 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SLC36A2Q495M3 483 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 FAM27BQ5VT28 67 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 C12orf73Q69YU5 71 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 LINGO2Q7L985 606 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CXXC5Q7LFL8 322 aaKnown RBP6.7□□□□□ -1.34
TDP1-214ENST00000556063 ZBTB46Q86UZ6 589 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CPOQ8IVL8 374 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
TDP1-214ENST00000556063 OR6V1Q8N148 313 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SLC22A24Q8N4F4 322 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 DHRSXQ8N5I4 330 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CYB561A3Q8NBI2 242 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SETD9Q8NE22 299 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 PROKR2Q8NFJ6 384 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 OR10H5Q8NGA6 315 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 OR8J1Q8NGP2 316 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 BOD1Q96IK1 185 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 APOL4Q9BPW4 351 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SPOCK3Q9BQ16 436 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 GRIP2Q9C0E4 1043 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 SIAEQ9HAT2 523 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 CCNB1IP1Q9NPC3 277 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 NPDC1Q9NQX5 325 aaPredicted RBP6.7□□□□□ -1.34
TDP1-214ENST00000556063 SLC17A5Q9NRA2 495 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 KCNG2Q9UJ96 466 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 FBXL3Q9UKT7 428 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 B9D1Q9UPM9 204 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 COA3Q9Y2R0 106 aaPredicted RBP6.7□□□□□ -1.34
TDP1-214ENST00000556063 POLR1DQ9Y2S0 133 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 GMPPBQ9Y5P6 360 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 ROS1P08922 2347 aa6.7□□□□□ -1.34
TDP1-214ENST00000556063 ARPC4-TTLL3A0A0A6YYG9 625 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 IGLV1-36A0A0B4J1U3 117 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 LOC100130705A0A1B0GUX0 176 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 H0YAE9 185 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 SLC16A6O15403 523 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 PRODHO43272 600 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 TLX2O43763 284 aaPredicted RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 SEC14L2O76054 403 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 GOSR1O95249 250 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 RAB36O95755 333 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 PTHP01270 115 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 HRGP04196 525 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 EPXP11678 715 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 CD79AP11912 226 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 B4GALT1P15291 398 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 EPHA2P29317 976 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 CCKARP32238 428 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 ARR3P36575 388 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 POLR2IP36954 125 aaKnown RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 PTDSS1P48651 473 aaKnown RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 HSPA13P48723 471 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 RPS7P62081 194 aaKnown RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 LSM6P62312 80 aaKnown RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 HSF2Q03933 536 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 PLP2Q04941 152 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 IL18R1Q13478 541 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 KEAP1Q14145 624 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 TSC22D1Q15714 1073 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 TAB1Q15750 504 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 HIKESHIQ53FT3 197 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 KLHL12Q53G59 568 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 SLC35D3Q5M8T2 416 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 ZNF362Q5T0B9 420 aaPredicted RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 LCN1P1Q5VSP4 162 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 MEDAGQ5VYS4 303 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 SP5Q6BEB4 398 aaPredicted RBP6.69□□□□□ -1.34
TDP1-214ENST00000556063 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
TDP1-214ENST00000556063 TMEM53Q6P2H8 277 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms