RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SF3B6Q9Y3B4 125 aaKnown RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 USP9YO00507 2555 aaPredicted RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 TRDV1A0A1B0GX56 115 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 MBD3L4A6NDZ8 208 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 MBD3L3A6NE82 208 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 MBD3L5A6NJ08 208 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 HSPB2A8KAH6 182 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 EEF1E1-BLOC1S5C9J1V9 151 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 LRRN3E7EW58 273 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 EEF1E1O43324 174 aaKnown RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 ZNF208O43345 1280 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 AKR7A3O95154 331 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 LYPD3O95274 346 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 AHSA1O95433 338 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 APOA1P02647 267 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 IMPDH2P12268 514 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 GTF2E2P29084 291 aaKnown RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 CHRNB4P30926 498 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 TNFSF8P32971 234 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 RBM34P42696 430 aaKnown RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 GPR4P46093 362 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 RAC3P60763 192 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 CSNK2A1P68400 391 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 HSPB2Q16082 182 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 SWI5Q1ZZU3 235 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 CLEC12AQ5QGZ9 265 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 RIPPLY2Q5TAB7 128 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 FCRLAQ7L513 359 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 LUZP2Q86TE4 346 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 MEX3DQ86XN8 651 aaKnown RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 CADM3Q8N126 398 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 LNX2Q8N448 690 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 MBD3L2Q8NHZ7 208 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 TAAR8Q969N4 342 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 CPNE4Q96A23 557 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 KCNS3Q9BQ31 491 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 BARHL1Q9BZE3 327 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 OR52D1Q9H346 318 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 C12orf49Q9H741 205 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 INPP5EQ9NRR6 644 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 ASB6Q9NWX5 421 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 PAQR5Q9NXK6 330 aaPredicted RBP8.77□□□□□ -1
PSEN1-213ENST00000555386 GPR52Q9Y2T5 361 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 MED31Q9Y3C7 131 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 HDGFL3Q9Y3E1 203 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 CMAHPQ9Y471 501 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 PKDREJQ9NTG1 2253 aa8.77□□□□□ -1
PSEN1-213ENST00000555386 PTPN13Q12923 2485 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 HCFC1P51610 2035 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 IGKV1D-42A0A075B6H8 117 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 A0A087WUJ7 227 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF814B7Z6K7 855 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 J3QRE1 110 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 BHLHE40O14503 412 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CTDSP2O14595 271 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CDC42EP2O14613 210 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 SMAD9O15198 467 aaKnown RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CHP2O43745 196 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 PIP5K1CO60331 668 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 RAMP1O60894 148 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 HLA-DPB1P04440 258 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 FCGR2AP12318 317 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CD53P19397 219 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CFL1P23528 166 aaKnown RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CTSSP25774 331 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 TIMP3P35625 211 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 DLX5P56178 289 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 EGR4Q05215 589 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 RASGEF1BQ0VAM2 473 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 VWA1Q6PCB0 445 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 TMPRSS11AQ6ZMR5 421 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CXXC5Q7LFL8 322 aaKnown RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ADGRE4PQ86SQ3 457 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 GPAT4Q86UL3 456 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 TMEM99Q8N816 258 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ZBTB8BQ8NAP8 495 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 PFN4Q8NHR9 129 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 FANK1Q8TC84 345 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 TRMT61AQ96FX7 289 aaKnown RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 TXNDC15Q96J42 360 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 SAMD8Q96LT4 415 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 OCSTAMPQ9BR26 566 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 SNTG1Q9NSN8 517 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CAB39Q9Y376 341 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF175Q9Y473 711 aa8.77□□□□□ -1.01
PSEN1-213ENST00000555386 CRYBG3Q68DQ2 2970 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 TRAV36DV7A0A075B6V5 113 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 A0A1W2PNV4 684 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 HTR3EA5X5Y0 456 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 LIPT2A6NK58 231 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SLC22A31A6NKX4 558 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 DVL2O14641 736 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SERPINI2O75830 405 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 CDRT1O95170 752 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 PMS2P2O95744 297 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 IFI30P13284 250 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 PAICSP22234 425 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms