RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HSP90AB3PQ58FF7 597 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM255AQ5JRV8 349 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 CARD17Q5XLA6 110 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF530Q6P9A1 599 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 BBS5Q8N3I7 341 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 MS4A15Q8N5U1 240 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 EID2Q8N6I1 236 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 OR7G2Q8NG99 324 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 CXorf40AQ8TE69 158 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 GEMIN6Q8WXD5 167 aaKnown RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 AURKBQ96GD4 344 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 SMIM10Q96HG1 83 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF578Q96N58 590 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 TSNARE1Q96NA8 513 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF331Q9NQX6 463 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 STOX2Q9P2F5 926 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 NEU3Q9UQ49 428 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 TONSLQ96HA7 1378 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ABCC11Q96J66 1382 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 DEPDC5O75140 1603 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 CROCC2H7BZ55 1655 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 C3P01024 1663 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 KDM5AP29375 1690 aaKnown RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 TRBV6-6A0A0A6YYG2 114 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 FAM166BA8MTA8 275 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 PES1O00541 588 aaKnown RBP3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 UNC13BO14795 1591 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 PPP1R2P9O14990 202 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 KRT14P02533 472 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 FGGP02679 453 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 TPM2P07951 284 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 PSG2P11465 335 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 FOXN2P32314 431 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 NMUP48645 174 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 LHX2P50458 406 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 RORCP51449 518 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 SSR4P51571 173 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 CCNHP51946 323 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 CDH6P55285 790 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 YWHAGP61981 247 aaKnown RBP eCLIP3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 PSG5Q15238 335 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 VAX1Q5SQQ9 334 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 NIPA1Q7RTP0 329 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 IQGAP3Q86VI3 1631 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 TTC5Q8N0Z6 440 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 PDIK1LQ8N165 341 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 LIX1Q8N485 282 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 MDS2Q8NDY4 140 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM54Q969K7 222 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 CCDC126Q96EE4 140 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 USP47Q96K76 1375 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 FAM192AQ9GZU8 254 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 DEC1Q9P2X7 70 aa3.57□□□□□ -1.84
CKS1BP1-201ENST00000555221 NEURL4Q96JN8 1562 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 FAM135BQ49AJ0 1406 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM94Q12767 1356 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 TRAV39A0A0B4J263 110 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 IGKV1D-13A0A0B4J2D9 117 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 IGHV3-64DA0A0J9YX35 117 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 A0A1B0GVI7 797 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF726A6NNF4 738 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SGK1O00141 431 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 EEDO75530 441 aaKnown RBP3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLC25A27O95847 323 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 PCCAP05165 728 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 IGKV1-13P0DP09 117 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ADRB3P13945 408 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SERPINB5P36952 375 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 RPS10P46783 165 aaKnown RBP3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 REG3AQ06141 175 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 CUL2Q13617 745 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 PRPSAP1Q14558 356 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 RCN1Q15293 331 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 GUCA2BQ16661 112 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 PIGGQ5H8A4 983 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLC8B1Q6J4K2 584 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SASS6Q6UVJ0 657 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM179Q6ZVK1 233 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ARIH2OSQ8N7S6 290 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 OR4C5Q8NGB2 326 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 OR1S2Q8NGQ3 325 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ELMO1Q92556 727 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLC38A4Q969I6 547 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ASB9Q96DX5 294 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 PIK3IP1Q96FE7 263 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ATP5SQ99766 215 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 GABARAPL3Q9BY60 117 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 DNTTIP1Q9H147 329 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 UGT1A10Q9HAW8 530 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 UGT1A8Q9HAW9 530 aa3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 DMAP1Q9NPF5 467 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 PRRC2AP48634 2157 aaKnown RBP3.56□□□□□ -1.84
CKS1BP1-201ENST00000555221 ADGRB3O60242 1522 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 TRPM2O94759 1503 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 NKTRP30414 1462 aaKnown RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 DCCP43146 1447 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms