RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 MRPL24Q96A35 216 aaKnown RBP10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 FNDC11Q9BVV2 318 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 KCNN2Q9H2S1 579 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 ANKRD19PQ9H560 264 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 ACTR3BQ9P1U1 418 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 RPS6KA6Q9UK32 745 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 KCNS2Q9ULS6 477 aa10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 SAMD4AQ9UPU9 718 aaKnown RBP10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 CHD3Q12873 2000 aaKnown RBP10.61□□□□□ -0.71
CCDC85C-202ENST00000554877 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 IQCMA0A1B0GVH7 501 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 A0A1W2PRQ8 180 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 VWC2LB2RUY7 222 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 NDUFS8O00217 210 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ACOT8O14734 319 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 SYNGR3O43761 229 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 SLC2A10O95528 541 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 SERPINA5P05154 406 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PGA4P0DJD7 388 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PGA3P0DJD8 388 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 SAGP10523 405 aaPredicted RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 NAT2P11245 290 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ACADSP16219 412 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF26P17031 533 aaPredicted RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 MAKP20794 623 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 COL8A2P25067 703 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 MAGEA2P43356 314 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 HSF2Q03933 536 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PLP2Q04941 152 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PRKCDQ05655 676 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 CD47Q08722 323 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 CCNIQ14094 377 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 DGCR6Q14129 220 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 HIST3H3Q16695 136 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 LCN8Q6JVE9 175 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF627Q7L945 461 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF540Q8NDQ6 660 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 OR51A7Q8NH64 312 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ASB10Q8WXI3 467 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 MSI2Q96DH6 328 aaKnown RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PYURFQ96I23 114 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF75AQ96N20 296 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 SNX18Q96RF0 628 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 NMNAT1Q9HAN9 279 aaPredicted RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 CCNB1IP1Q9NPC3 277 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 PRPF19Q9UMS4 504 aaKnown RBP10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 HIF3AQ9Y2N7 669 aa10.6□□□□□ -0.71
CCDC85C-202ENST00000554877 HTR3EA5X5Y0 456 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 NPIPB13A6NJU9 1138 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 NPIPB4C9JG80 1138 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 M0R233 179 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CDC42EP2O14613 210 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ENTPD5O75356 428 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CLPTM1O96005 669 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF23P17027 643 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 RHCEP18577 417 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 APEX1P27695 318 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 GLRXP35754 106 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 LIMS1P48059 325 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 DAP3P51398 398 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF133P52736 654 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 SELENOVP59797 346 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CTXN1P60606 82 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ERVS71-1P61550 626 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 RPS23P62266 143 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 GLO1Q04760 184 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 FMODQ06828 376 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 BNIP1Q12981 228 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TRIM25Q14258 630 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TRAM2Q15035 370 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 SEC23BQ15437 767 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TRIP10Q15642 601 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 SLC36A2Q495M3 483 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ALG10Q5BKT4 473 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 RGS7BPQ6MZT1 257 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TBPL2Q6SJ96 375 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CXXC5Q7LFL8 322 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 NOXO1Q8NFA2 376 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ACOT11Q8WXI4 607 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 BPIFA2Q96DR5 249 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CLPTM1LQ96KA5 538 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 MRPL13Q9BYD1 178 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 LRMDAQ9H2I8 198 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 DENND2DQ9H6A0 471 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 IL1RAPQ9NPH3 570 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 FBXO9Q9UK97 447 aaPredicted RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 CDC42EP3Q9UKI2 254 aa10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 ZNF346Q9UL40 294 aaKnown RBP10.59□□□□□ -0.71
CCDC85C-202ENST00000554877 TRAV27A0A087WT01 109 aa10.58□□□□□ -0.72
CCDC85C-202ENST00000554877 TRBV4-1A0A0J9YWV2 114 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms