RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 HAAOP46952 286 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 MFSD13AQ14CX5 517 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 RPL22L1Q6P5R6 122 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 PXKQ7Z7A4 578 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 ADAMTS17Q8TE56 1095 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 NKD1Q969G9 470 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 ZBTB8AQ96BR9 441 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 DTNBP1Q96EV8 351 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC25A18Q9H1K4 315 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 KCNN2Q9H2S1 579 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A1B0GVC2 190 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 A6NIN4 97 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 LRRC3CA6NJW4 275 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 LOC110117498-PIK3R3F6TDL0 507 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 TAF4O00268 1085 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 TNFSF11O14788 317 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 ITGA3P26006 1051 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 DSCR4P56555 118 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 CLDN20P56880 219 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 MFAP5Q13361 173 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 TMEM81Q6P7N7 255 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 MAP6Q96JE9 813 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 COQ7Q99807 217 aa11.38□□□□□ -0.59
VIPAS39-206ENST00000553888 AKAP13Q12802 2813 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 PIN1P1O15428 100 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 CD96P40200 585 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 EIF1P41567 113 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 CYB561P49447 251 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 STARP49675 285 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 DAP3P51398 398 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF45Q02386 682 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 DCAF10Q5QP82 559 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 VASH2Q86V25 355 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC22A16Q86VW1 577 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 UEVLDQ8IX04 471 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 UBQLNLQ8IYU4 475 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 CHPT1Q8WUD6 406 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 GPR87Q9BY21 358 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SIAEQ9HAT2 523 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 TIGARQ9NQ88 270 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A0G2JK05 382 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A1W2PNV4 684 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 A6NL46 340 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 C21orf140B9A014 251 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SSX4O60224 188 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 KRT8P05787 483 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 CDAP32320 146 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 ETV6P41212 452 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SOX2P48431 317 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 HSF2Q03933 536 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 EIF2B1Q14232 305 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 WIPI1Q5MNZ9 446 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 OR7E24Q6IFN5 339 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 FAM220AQ7Z4H9 259 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 PRSS35Q8N3Z0 413 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SGCZQ96LD1 299 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 ELOVL3Q9HB03 270 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 NOX4Q9NPH5 578 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 SACM1LQ9NTJ5 587 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 LRFN1Q9P244 771 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
VIPAS39-206ENST00000553888 BOD1L1Q8NFC6 3051 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A0J9YW62 118 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SEC14L5O43304 696 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 PNPP00491 289 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 OCM2P0CE71 109 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 EIF1AXP47813 144 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 CD97P48960 835 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 MTNR1BP49286 362 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 BAK1Q16611 211 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC26A10Q8NG04 563 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 MIB2Q96AX9 1013 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 TMEM41AQ96HV5 264 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 ABHD6Q9BV23 337 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 FBXL3Q9UKT7 428 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 AK6Q9Y3D8 172 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 TRABD2BA6NFA1 517 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 A6NIZ1 184 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 EIF1AYO14602 144 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 CBR3O75828 277 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 ADH6P28332 368 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 RAP1BP61224 184 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 RAP1AP62834 184 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 GLO1Q04760 184 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms