RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
APEX1-205ENST00000553555 PARPBPQ9NWS1 579 aa12.17□□□□□ -0.46
APEX1-205ENST00000553555 ZMIZ1Q9ULJ6 1067 aa12.17□□□□□ -0.46
APEX1-205ENST00000553555 CLEC4AQ9UMR7 237 aa12.17□□□□□ -0.46
APEX1-205ENST00000553555 COPS3Q9UNS2 423 aa12.17□□□□□ -0.46
APEX1-205ENST00000553555 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
APEX1-205ENST00000553555 ACACBO00763 2458 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 SMIM31A0A1B0GVY4 71 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 H3BSA7 217 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 ZNF593O00488 134 aaPredicted RBP12.16□□□□□ -0.46
APEX1-205ENST00000553555 MRPL33O75394 65 aaKnown RBP12.16□□□□□ -0.46
APEX1-205ENST00000553555 MPZL1O95297 269 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 HRGP04196 525 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 TIGD6Q17RP2 521 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 SSX6Q7RTT6 188 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 P4HA3Q7Z4N8 544 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 RFLNBQ8N5W9 214 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 OR6N2Q8NGY6 317 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 OR52N1Q8NH53 320 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 GATAD2BQ8WXI9 593 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 MGLLQ99685 303 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 CALHM2Q9HA72 323 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 GP6Q9HCN6 339 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
APEX1-205ENST00000553555 ZZEF1O43149 2961 aa12.16□□□□□ -0.46
APEX1-205ENST00000553555 ZNF670-ZNF695F2Z2N8 137 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 DHHO43323 396 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 UPK3AO75631 287 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 SCG5P05408 212 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 PSKH1P11801 424 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 ZNF823P16415 610 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 ENTPD1P49961 510 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 MEP1BQ16820 701 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 ARMCX4Q5H9R4 360 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 OTPQ5XKR4 325 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 ZNF322Q6U7Q0 402 aaPredicted RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 TMPRSS11AQ6ZMR5 421 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 SPRYD4Q8WW59 207 aaPredicted RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 SNRNP40Q96DI7 357 aaKnown RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 ULBP2Q9BZM5 246 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 ISG20L2Q9H9L3 353 aaKnown RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 ISYNA1Q9NPH2 558 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 UGT2A1Q9Y4X1 527 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 TMEM14AQ9Y6G1 99 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 CEPT1Q9Y6K0 416 aa12.15□□□□□ -0.46
APEX1-205ENST00000553555 SPENQ96T58 3664 aaKnown RBP12.15□□□□□ -0.46
APEX1-205ENST00000553555 A0A1W2PPL8 197 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 HSMCR30P0CW71 290 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 ALOX5APP20292 161 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 LIPAP38571 399 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 RPS27P42677 84 aaKnown RBP12.15□□□□□ -0.47
APEX1-205ENST00000553555 ADAM8P78325 824 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 KLRB1Q12918 225 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 SF3B4Q15427 424 aaKnown RBP eCLIP12.15□□□□□ -0.471e-8■■■□□ 17.2
APEX1-205ENST00000553555 KCNMB1Q16558 191 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 PCK2Q16822 640 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 ACSF3Q4G176 576 aaPredicted RBP12.15□□□□□ -0.47
APEX1-205ENST00000553555 ZNF585AQ6P3V2 769 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 FOXL2NBQ6ZUU3 175 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.15□□□□□ -0.47
APEX1-205ENST00000553555 GPR137CQ8N3F9 429 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 OTOSQ8NHW6 89 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 WNT2BQ93097 391 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.47
APEX1-205ENST00000553555 YIPF6Q96EC8 236 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 OPALINQ96PE5 141 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 RBM24Q9BX46 236 aaKnown RBP12.15□□□□□ -0.47
APEX1-205ENST00000553555 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 SEC61A2Q9H9S3 476 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 B3GAT2Q9NPZ5 323 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 LAMP5Q9UJQ1 280 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 KLHDC2Q9Y2U9 406 aa12.15□□□□□ -0.47
APEX1-205ENST00000553555 PKD1L2Q7Z442 2459 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 OR6C65A6NJZ3 312 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 PHYHO14832 338 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 EDNRAP25101 427 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 CDAP32320 146 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 ZNF84P51523 738 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 ACSM1Q08AH1 577 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 CNPY1Q3B7I2 92 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 CDONQ4KMG0 1287 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 GPR107Q5VW38 600 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 NSUN5P2Q63ZY6 315 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 C19orf48Q6RUI8 117 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 NUFIP2Q7Z417 695 aaKnown RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 CLVS1Q8IUQ0 354 aaPredicted RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms