RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ABCD2Q9UBJ2 740 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 MED31Q9Y3C7 131 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 CMAHPQ9Y471 501 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 SNX13Q9Y5W8 968 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 TRAV20A0A0B4J274 112 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 HTR3EA5X5Y0 456 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 NPIPB13A6NJU9 1138 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 CENPBD1B2RD01 187 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 NPIPB4C9JG80 1138 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 CXCR6O00574 342 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 FFAR1O14842 300 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 DHHO43323 396 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 BCL10O95999 233 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 TFP02787 698 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 ZNF35P13682 527 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 B4GALT1P15291 398 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 ZNF14P17017 642 aaPredicted RBP10.13□□□□□ -0.79
SRP54-203ENST00000553544 COL8A2P25067 703 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 AQP2P41181 271 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 EVX1P49640 407 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 ZNF133P52736 654 aaPredicted RBP10.13□□□□□ -0.79
SRP54-203ENST00000553544 NPRL3Q12980 569 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 KRT72Q14CN4 511 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 GSG1Q2KHT4 349 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 CDK20Q8IZL9 346 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 PGAM4Q8N0Y7 254 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 SUCNR1Q9BXA5 334 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 TMEM38BQ9NVV0 291 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 TREM2Q9NZC2 230 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 REV1Q9UBZ9 1251 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 HIF3AQ9Y2N7 669 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 PCDHGB1Q9Y5G3 927 aa10.13□□□□□ -0.79
SRP54-203ENST00000553544 A0A1W2PRG6 482 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 J3KTA2 159 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 SYNGR3O43761 229 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 PIP5K1CO60331 668 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 PRSS23O95084 383 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 PNPP00491 289 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 IGHG1P01857 330 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 F13BP05160 661 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 IGFBP1P08833 259 aaPredicted RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 QDPRP09417 244 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 GAAP10253 952 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 SAGP10523 405 aaPredicted RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 CD79AP11912 226 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 CALB2P22676 271 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 CAPZA2P47755 286 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 PSME3P61289 254 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 RAB1AP62820 205 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 MYBPC1Q00872 1141 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 PIGFQ07326 219 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 FOXL1Q12952 345 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 DAG1Q14118 895 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 NRN1LQ496H8 165 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 SAMD4BQ5PRF9 694 aaKnown RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 ARMC4Q5T2S8 1044 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 TSEN54Q7Z6J9 526 aaKnown RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 OFCC1Q8IZS5 231 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 ARHGAP24Q8N264 748 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 SLC22A24Q8N4F4 322 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 MOSPD2Q8NHP6 518 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 FGFBP3Q8TAT2 258 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 BCAS4Q8TDM0 211 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 GEMIN6Q8WXD5 167 aaKnown RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 ASB10Q8WXI3 467 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 RDH5Q92781 318 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 POP5Q969H6 163 aaKnown RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 MCHR2Q969V1 340 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 NMD3Q96D46 503 aaKnown RBP10.12□□□□□ -0.79
SRP54-203ENST00000553544 ZNF347Q96SE7 839 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 RACGAP1Q9H0H5 632 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 NARFLQ9H6Q4 476 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 INIPQ9NRY2 104 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 RPS6KA6Q9UK32 745 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
SRP54-203ENST00000553544 TRMUO75648 421 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 UBL3O95164 117 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 SERPINA1P01009 418 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 IFNW1P05000 195 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 SERPINA5P05154 406 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 PATE4P0C8F1 98 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 OR8G3PP0DMU2 310 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 ACADSP16219 412 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 ACHEP22303 614 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 NR4A1P22736 598 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 YAP1P46937 504 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 GIPRP48546 466 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 PRKCDQ05655 676 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 SNTB2Q13425 540 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 FHL1Q13642 323 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 TRAM2Q15035 370 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 IFI44LQ53G44 452 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 ELFN2Q5R3F8 820 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 C10orf128Q5T292 105 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 ACSM5Q6NUN0 579 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 ZNF584Q8IVC4 421 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms