RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 COX4I2Q96KJ9 171 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 LRGUKQ96M69 825 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 CCNB1IP1Q9NPC3 277 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 NRIP3Q9NQ35 241 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 TEP1Q99973 2627 aaKnown RBP13.27□□□□□ -0.28
SHMT2-204ENST00000553324 H7C1Q1 480 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 F12P00748 615 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 ERCC1P07992 297 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 PATE4P0C8F1 98 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 APEHP13798 732 aaKnown RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 SDHAP31040 664 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 THBS4P35443 961 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 GLRXP35754 106 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 RPS6KA3P51812 740 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 EFNA4P52798 201 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 PCBD1P61457 104 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 TRAP1Q12931 704 aaKnown RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 SGCAQ16586 387 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 FAM98BQ52LJ0 330 aaKnown RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 SMARCD3Q6STE5 483 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 FAM122BQ7Z309 247 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 MYPOPQ86VE0 399 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 ALDH16A1Q8IZ83 802 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 ZNF570Q96NI8 536 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 RHNO1Q9BSD3 238 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 TRIM15Q9C019 465 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 SLC7A8Q9UHI5 535 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 GDF2Q9UK05 429 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-204ENST00000553324 UGT2A1Q9Y4X1 527 aa13.27□□□□□ -0.29
SHMT2-204ENST00000553324 PRSS37A4D1T9 235 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TRIM64A6NGJ6 449 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TRIM64BA6NI03 449 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TNFRSF11BO00300 401 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 IMPA2O14732 288 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 GYG2O15488 501 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 SSX4O60224 188 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 FPR3P25089 353 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 CDAP32320 146 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 RAD52P43351 418 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 MAGEA2P43356 314 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 HSF2Q03933 536 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TNK1Q13470 666 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TBC1D28Q2M2D7 210 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 RFX4Q33E94 735 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 C1orf94Q6P1W5 598 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 CLEC2AQ6UVW9 174 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 UNQ6126/PRO20091Q6UXV3 157 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 ADCK1Q86TW2 530 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 ZNF584Q8IVC4 421 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 SLC30A7Q8NEW0 376 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 FGFBP3Q8TAT2 258 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 Q96M85 177 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 ADAM18Q9Y3Q7 739 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 TIMM10BQ9Y5J6 103 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
SHMT2-204ENST00000553324 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 IGKV1D-43A0A0B4J1Z2 117 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 TCRBV5S2A0A599 114 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 C12orf71A8MTZ7 269 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 NDUFS7O75251 213 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 SNAP29O95721 258 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 TXNDC12O95881 172 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 CST2P09228 141 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-204ENST00000553324 CSF3P09919 207 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 ZNF26P17031 533 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-204ENST00000553324 ATP6V1B2P21281 511 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 SLC6A6P31641 620 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 APLNRP35414 380 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 PPOXP50336 477 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 RIPPLY3P57055 190 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 SELENOVP59797 346 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 MS4A2Q01362 244 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 FMODQ06828 376 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 TSPAN31Q12999 210 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 GK3PQ14409 553 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 DNM1P46Q6ZS02 220 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 FOXL2NBQ6ZUU3 175 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 C1orf174Q8IYL3 243 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 NABP1Q96AH0 204 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 DOK1Q99704 481 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 CDH20Q9HBT6 801 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 IER3IP1Q9Y5U9 82 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
SHMT2-204ENST00000553324 TEX13CA0A0J9YWL9 993 aa13.24□□□□□ -0.29
SHMT2-204ENST00000553324 SMAD7O15105 426 aaKnown RBP13.24□□□□□ -0.29
SHMT2-204ENST00000553324 ARPC3O15145 178 aa13.24□□□□□ -0.29
SHMT2-204ENST00000553324 IDH3BO43837 385 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms