RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ECH1Q13011 328 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ETFDHQ16134 617 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 SGCAQ16586 387 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ZSCAN26Q16670 478 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF672Q499Z4 452 aaPredicted RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 HIKESHIQ53FT3 197 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC25A47Q6Q0C1 308 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 FBXL14Q8N1E6 418 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 OR10H5Q8NGA6 315 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 TMEM171Q8WVE6 324 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 HDAC2Q92769 488 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 TRMT61AQ96FX7 289 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 SAMD8Q96LT4 415 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 Q96M85 177 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 DHRS9Q9BPW9 319 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 RBM4BQ9BQ04 359 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 RBM4Q9BWF3 364 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 TSSK6Q9BXA6 273 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 RACGAP1Q9H0H5 632 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 SEC61A2Q9H9S3 476 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 PAPOLBQ9NRJ5 636 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 EIF3KQ9UBQ5 218 aaKnown RBP8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ST6GALNAC2Q9UJ37 374 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 MOKQ9UQ07 419 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 PMF1-BGLAPU3KQ54 211 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 MAST4O15021 2626 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 APCP25054 2843 aa8.96□□□□□ -0.97
TRAFD1-208ENST00000552890 J3QW42 95 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC16A7O60669 478 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 COX5BP10606 129 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF23P17027 643 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 EDNRAP25101 427 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 PCSK6P29122 969 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 APOBEC3AP31941 199 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 GRK5P34947 590 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 RAD52P43351 418 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 GIPRP48546 466 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 EVX1P49640 407 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 RAD23AP54725 363 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 CDH11P55287 796 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 AQP6Q13520 282 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 FHL1Q13642 323 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 SNTB1Q13884 538 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 TSC22D1Q15714 1073 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 PAMR1Q6UXH9 720 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 FOXL2NBQ6ZUU3 175 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 LRRC75A-AS1Q8N1F1 130 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 NUP37Q8NFH4 326 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 GJC3Q8NFK1 279 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 OR9Q2Q8NGE9 314 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 AKAP1Q92667 903 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 UTP4Q969X6 686 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 NMD3Q96D46 503 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 MYCBPQ99417 103 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 CDADC1Q9BWV3 514 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 BCL2L14Q9BZR8 327 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 PLEKHF2Q9H8W4 249 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 ELOVL3Q9HB03 270 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 BARX1Q9HBU1 254 aaPredicted RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 CMC2Q9NRP2 79 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 KRT84Q9NSB2 600 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 B3GNT2Q9NY97 397 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 CISD1Q9NZ45 108 aaKnown RBP8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 POLR1DQ9Y2S0 133 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 ADAM18Q9Y3Q7 739 aa8.96□□□□□ -0.98
TRAFD1-208ENST00000552890 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 A0A1W2PPL8 197 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 DPRXA6NFQ7 191 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 H3BSA7 217 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 BHLHE40O14503 412 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SOCS2O14508 198 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 TIPRLO75663 272 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 PPP1R3DO95685 299 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SNAP29O95721 258 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 APOC1P02654 83 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 MT-ND5P03915 603 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF823P16415 610 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 FMO3P31513 532 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 RGS6P49758 472 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC25A1P53007 311 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 NAAAQ02083 359 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 CCNIQ14094 377 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 FAM209AQ5JX71 171 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 FAHD1Q6P587 224 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 LEG1Q6P5S2 330 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 LINGO2Q7L985 606 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 MDP1Q86V88 176 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 IGFN1Q86VF2 1251 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SMAP2Q8WU79 429 aaPredicted RBP8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 DCLRE1CQ96SD1 692 aaKnown RBP8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 CCL19Q99731 98 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 FOXC2Q99958 501 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 C9orf16Q9BUW7 83 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SYT4Q9H2B2 425 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF442Q9H7R0 627 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 SP140LQ9H930 580 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 UBTD1Q9HAC8 227 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms