RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SIAEQ9HAT2 523 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 NOX3Q9HBY0 568 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 VNN3Q9NY84 501 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF224Q9NZL3 707 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 CSMD2Q7Z408 3487 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 USF3Q68DE3 2245 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 PRRC2AP48634 2157 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 IGKV1D-43A0A0B4J1Z2 117 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 TCRBV3S1A0A5B6 114 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 SLC22A23A1A5C7 686 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 FKBP6O75344 327 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 DANCRP0C864 163 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 PATE4P0C8F1 98 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 CDAP32320 146 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 TTKP33981 857 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 FXYD6P3P58550 94 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 NKX6-1P78426 367 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 CBX1P83916 185 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 HSF2Q03933 536 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 PLP2Q04941 152 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 MICAQ29983 383 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 PGGHGQ32M88 737 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 C1orf146Q5VVC0 180 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 SPNS3Q6ZMD2 512 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 LRRC75A-AS1Q8N1F1 130 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 MUC15Q8N387 334 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 OR10G2Q8NGC3 310 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 SAMD8Q96LT4 415 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 RERGLQ9H628 205 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 UGT2A1Q9Y4X1 527 aa16.05■□□□□ 0.16
PRPF40B-216ENST00000552301 IGHV2OR16-5A0A0B4J2B6 119 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 VSTM5A8MXK1 200 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 TXNDC12O95881 172 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 PTHP01270 115 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 GSTM3P21266 225 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 CALCRP30988 508 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 ATP5J2P56134 94 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 RAB39AQ14964 217 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 DNM1P34Q6PK57 102 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 VHLLQ6RSH7 139 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 DTX2Q86UW9 622 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 MYPOPQ86VE0 399 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 GIPC3Q8TF64 312 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 TRMT61AQ96FX7 289 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 MS4A3Q96HJ5 214 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 TRAF4Q9BUZ4 470 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 GSX2Q9BZM3 304 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 SYT4Q9H2B2 425 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 C1orf198Q9H425 327 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 CBLN4Q9NTU7 201 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 TBC1D23Q9NUY8 699 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
PRPF40B-216ENST00000552301 IQCMA0A1B0GVH7 501 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 EBAG9O00559 213 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 IMPA2O14732 288 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 ARPC3O15145 178 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 KHDRBS3O75525 346 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 RENP00797 406 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 GASTP01350 101 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 SERPINA5P05154 406 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 BMP4P12644 408 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF14P17017 642 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 MSR1P21757 451 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 APOBEC3AP31941 199 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 PTH2RP49190 550 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 GALK2Q01415 458 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 CLEC12AQ5QGZ9 265 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 SHEQ5VZ18 495 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF770Q6IQ21 691 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 FGFBP3Q8TAT2 258 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 EGLN3Q9H6Z9 239 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 CDH20Q9HBT6 801 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 CA10Q9NS85 328 aa16.03■□□□□ 0.16
PRPF40B-216ENST00000552301 IDH3BO43837 385 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 SLC16A7O60669 478 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 LAP3P28838 519 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 CRABP1P29762 137 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 CDKN1AP38936 164 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 PCBD1P61457 104 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 SNTB2Q13425 540 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 DAG1Q14118 895 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 Q5PR19 223 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 FAM27BQ5VT28 67 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 LEG1Q6P5S2 330 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 SLC30A7Q8NEW0 376 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 NUP37Q8NFH4 326 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 IGFBPL1Q8WX77 278 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 NABP1Q96AH0 204 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 DGCR6LQ9BY27 220 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 GRIP2Q9C0E4 1043 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF701Q9NV72 531 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 VSX1Q9NZR4 365 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 DNAJB9Q9UBS3 223 aa16.02■□□□□ 0.16
PRPF40B-216ENST00000552301 AKAP9Q99996 3911 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 ARRDC5A6NEK1 342 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 DEAF1O75398 565 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 CST2P09228 141 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms