RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RUSC1-AS1Q66K80 236 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 Q6YL49 198 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF627Q7L945 461 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 LCA5Q86VQ0 697 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 TSPYL5Q86VY4 417 aaPredicted RBP4.49□□□□□ -1.69
HOXB3-213ENST00000552000 ANKRD46Q86W74 232 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 SKA3Q8IX90 412 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 RIMKLAQ8IXN7 391 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF440Q8IYI8 595 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 C1orf174Q8IYL3 243 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 CNPY4Q8N129 248 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 MIER2Q8N344 545 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 KLHL36Q8N4N3 616 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 OR4A15Q8NGL6 344 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 OR6N1Q8NGY5 312 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 TWIST2Q8WVJ9 160 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 UPRTQ96BW1 309 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 NEURL3Q96EH8 262 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 SLC47A1Q96FL8 570 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 MPP4Q96JB8 637 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 FOXB1Q99853 325 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 PTDSS2Q9BVG9 487 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 ULBP2Q9BZM5 246 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 DPY30Q9C005 99 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 EGLN1Q9GZT9 426 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 SLC38A1Q9H2H9 487 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 NOX4Q9NPH5 578 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 B3GAT2Q9NPZ5 323 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 FBXL3Q9UKT7 428 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 DNAJC15Q9Y5T4 150 aa4.49□□□□□ -1.69
HOXB3-213ENST00000552000 LYSTQ99698 3801 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 A0A087WUV0 522 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 A0A096LPI6 279 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 IGHV2-70DA0A0C4DH43 119 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PLSCR5A0PG75 271 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 ZSCAN5BA6NJL1 495 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 F5H0A9 414 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 HMGN4O00479 90 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 SERPINI2O75830 405 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 IGHV3-13P01766 116 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 C1QCP02747 245 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 DBIP07108 87 aaKnown RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PPIAL4GP0DN37 164 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 THRBP10828 461 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 RPS4Y1P22090 263 aaKnown RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 UQCRC2P22695 453 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 GCAP28676 217 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 CHI3L1P36222 383 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 MPV17P39210 176 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 CSNK1A1P48729 337 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 MMP15P51511 669 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 UCP2P55851 309 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PAX2Q02962 417 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 EGR4Q05215 589 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 DBPQ10586 325 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 ODF1Q14990 250 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 ZMYND11Q15326 602 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM155Q4W5P6 130 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM255AQ5JRV8 349 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 C6orf136Q5SQH8 315 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 THEM4Q5T1C6 240 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 KANK2Q63ZY3 851 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 C6orf89Q6UWU4 347 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 BTNL3Q6UXE8 466 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 CCBE1Q6UXH8 406 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 LRRN1Q6UXK5 716 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF836Q6ZNA1 936 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 LRRC74BQ6ZQY2 392 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 RNF165Q6ZSG1 346 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 Q6ZSV7 163 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 H1FNTQ75WM6 255 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 LRRC28Q86X40 367 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 SNX32Q86XE0 403 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 VRK2Q86Y07 508 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 UEVLDQ8IX04 471 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM86BQ8N661 226 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 CCDC63Q8NA47 563 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 FNDC5Q8NAU1 212 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 CPEB3Q8NE35 698 aaKnown RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PNPT1Q8TCS8 783 aaKnown RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 SSMEM1Q8WWF3 244 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 SGCDQ92629 289 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TAAR8Q969N4 342 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PPP1R14AQ96A00 147 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TXNDC15Q96J42 360 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 LRR1Q96L50 414 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 PPP3R2Q96LZ3 170 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 Q96M66 194 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 LRGUKQ96M69 825 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TRNT1Q96Q11 434 aaKnown RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 SH3GL3Q99963 347 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 MECRQ9BV79 373 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 BCL2L14Q9BZR8 327 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 MTHFD2LQ9H903 347 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 RNF121Q9H920 327 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms